Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COLCA2A8K830 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COLCA2A8K830 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COLCA2A8K830 LINC00526-201ENST00000581067 1875 ntBASIC18.47■□□□□ 0.55
COLCA2A8K830 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.47■□□□□ 0.55
COLCA2A8K830 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
COLCA2A8K830 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COLCA2A8K830 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
COLCA2A8K830 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
COLCA2A8K830 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COLCA2A8K830 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.46■□□□□ 0.55
COLCA2A8K830 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COLCA2A8K830 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
COLCA2A8K830 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COLCA2A8K830 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.46■□□□□ 0.55
COLCA2A8K830 AC142472.1-201ENST00000612013 1741 ntBASIC18.46■□□□□ 0.55
COLCA2A8K830 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
COLCA2A8K830 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.45■□□□□ 0.54
COLCA2A8K830 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
COLCA2A8K830 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
COLCA2A8K830 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COLCA2A8K830 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.45■□□□□ 0.54
COLCA2A8K830 AC141586.4-201ENST00000624558 1573 ntBASIC18.45■□□□□ 0.54
COLCA2A8K830 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.45■□□□□ 0.54
COLCA2A8K830 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COLCA2A8K830 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COLCA2A8K830 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COLCA2A8K830 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
COLCA2A8K830 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.45■□□□□ 0.54
COLCA2A8K830 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COLCA2A8K830 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
COLCA2A8K830 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COLCA2A8K830 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
COLCA2A8K830 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COLCA2A8K830 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
COLCA2A8K830 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COLCA2A8K830 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
COLCA2A8K830 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COLCA2A8K830 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COLCA2A8K830 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COLCA2A8K830 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COLCA2A8K830 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
COLCA2A8K830 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COLCA2A8K830 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
COLCA2A8K830 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COLCA2A8K830 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COLCA2A8K830 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
COLCA2A8K830 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC18.42■□□□□ 0.54
COLCA2A8K830 FOXO3B-201ENST00000395675 1928 ntBASIC18.42■□□□□ 0.54
COLCA2A8K830 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COLCA2A8K830 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.42■□□□□ 0.54
COLCA2A8K830 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COLCA2A8K830 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COLCA2A8K830 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COLCA2A8K830 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COLCA2A8K830 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COLCA2A8K830 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COLCA2A8K830 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COLCA2A8K830 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.41■□□□□ 0.54
COLCA2A8K830 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COLCA2A8K830 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COLCA2A8K830 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COLCA2A8K830 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.41■□□□□ 0.54
COLCA2A8K830 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COLCA2A8K830 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.41■□□□□ 0.54
COLCA2A8K830 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.4■□□□□ 0.54
COLCA2A8K830 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC18.4■□□□□ 0.54
COLCA2A8K830 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
COLCA2A8K830 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COLCA2A8K830 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
COLCA2A8K830 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COLCA2A8K830 AC092667.1-201ENST00000434301 2586 ntBASIC18.39■□□□□ 0.54
COLCA2A8K830 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.39■□□□□ 0.54
COLCA2A8K830 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
COLCA2A8K830 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.39■□□□□ 0.53
COLCA2A8K830 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.39■□□□□ 0.53
COLCA2A8K830 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COLCA2A8K830 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COLCA2A8K830 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COLCA2A8K830 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
COLCA2A8K830 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.38■□□□□ 0.53
COLCA2A8K830 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.38■□□□□ 0.53
COLCA2A8K830 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC18.38■□□□□ 0.53
COLCA2A8K830 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COLCA2A8K830 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COLCA2A8K830 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC18.37■□□□□ 0.53
COLCA2A8K830 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COLCA2A8K830 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
COLCA2A8K830 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
COLCA2A8K830 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
COLCA2A8K830 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COLCA2A8K830 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COLCA2A8K830 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COLCA2A8K830 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COLCA2A8K830 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.36■□□□□ 0.53
COLCA2A8K830 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COLCA2A8K830 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COLCA2A8K830 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COLCA2A8K830 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COLCA2A8K830 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms