Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 AP001889.1-201ENST00000525414 633 ntBASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 AC106872.11-201ENST00000605838 421 ntBASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 AC091271.1-201ENST00000611877 1162 ntBASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 AC006277.1-201ENST00000624348 1610 ntBASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCH2Q9Y6C5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 AC006033.1-201ENST00000440505 426 ntBASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 AC016396.2-201ENST00000562575 1417 ntBASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 AL118558.3-201ENST00000607414 1079 ntBASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 AL391069.4-201ENST00000609583 481 ntBASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 AC018470.1-201ENST00000624790 3129 ntBASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTCH2Q9Y6C5 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 KRT8P39-201ENST00000396270 1433 ntBASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 AC068587.3-201ENST00000526613 355 ntBASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 AC036164.1-201ENST00000570544 333 ntBASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 RN7SL560P-201ENST00000577943 264 ntBASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 MIR6727-201ENST00000620702 65 ntBASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 SNX33P1-201ENST00000592116 1762 ntBASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.35■□□□□ 0.53
PTCH2Q9Y6C5 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PTCH2Q9Y6C5 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.34■□□□□ 0.53
PTCH2Q9Y6C5 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTCH2Q9Y6C5 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTCH2Q9Y6C5 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTCH2Q9Y6C5 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTCH2Q9Y6C5 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms