Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTCBQ9Y3I0 GGT4P-201ENST00000623672 1708 ntBASIC20.53■□□□□ 0.88
RTCBQ9Y3I0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTCBQ9Y3I0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC20.53■□□□□ 0.88
RTCBQ9Y3I0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 AL442647.2-201ENST00000429864 857 ntBASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 HNRNPA1P13-201ENST00000510646 963 ntBASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 AC036164.1-201ENST00000570544 333 ntBASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 AC133539.2-201ENST00000604757 467 ntBASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 AL391069.4-201ENST00000609583 481 ntBASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 Z97205.2-201ENST00000564697 1639 ntBASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTCBQ9Y3I0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RTCBQ9Y3I0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.52■□□□□ 0.87
RTCBQ9Y3I0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RTCBQ9Y3I0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.52■□□□□ 0.87
RTCBQ9Y3I0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RTCBQ9Y3I0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
RTCBQ9Y3I0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.52■□□□□ 0.87
RTCBQ9Y3I0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RTCBQ9Y3I0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 ACTG1P3-201ENST00000431775 1114 ntBASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 MIR5189-201ENST00000577370 114 ntBASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 AL022328.1-201ENST00000610050 478 ntBASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 CU634019.7-201ENST00000624153 1185 ntBASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 FP236241.2-201ENST00000624906 1185 ntBASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 TUBB1P2-201ENST00000422712 1306 ntBASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 TUBB1P1-201ENST00000503144 1300 ntBASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.51■□□□□ 0.87
RTCBQ9Y3I0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 AC099336.1-201ENST00000417053 1171 ntBASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 AL355994.2-201ENST00000447882 704 ntBASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 MIR4321-201ENST00000592276 80 ntBASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 LINC01115-203ENST00000606068 577 ntBASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTCBQ9Y3I0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms