Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHA4Q9UN74 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PCDHA4Q9UN74 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHA4Q9UN74 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PCDHA4Q9UN74 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHA4Q9UN74 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHA4Q9UN74 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHA4Q9UN74 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHA4Q9UN74 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PCDHA4Q9UN74 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PCDHA4Q9UN74 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.77■□□□□ 0.6
PCDHA4Q9UN74 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PCDHA4Q9UN74 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHA4Q9UN74 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHA4Q9UN74 AC254562.1-201ENST00000417586 456 ntBASIC18.77■□□□□ 0.6
PCDHA4Q9UN74 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDHA4Q9UN74 AC098859.1-201ENST00000502915 1238 ntBASIC18.77■□□□□ 0.6
PCDHA4Q9UN74 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDHA4Q9UN74 AC093520.2-201ENST00000561830 333 ntBASIC18.77■□□□□ 0.6
PCDHA4Q9UN74 SPTSSB-204ENST00000617024 1292 ntBASIC18.77■□□□□ 0.6
PCDHA4Q9UN74 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHA4Q9UN74 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHA4Q9UN74 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHA4Q9UN74 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHA4Q9UN74 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PCDHA4Q9UN74 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHA4Q9UN74 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.77■□□□□ 0.59
PCDHA4Q9UN74 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
PCDHA4Q9UN74 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHA4Q9UN74 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHA4Q9UN74 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 UXT-AS1-201ENST00000590504 1525 ntBASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 AC004835.2-201ENST00000603762 682 ntBASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PCDHA4Q9UN74 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 AL627223.1-201ENST00000416693 442 ntBASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 AC005237.2-201ENST00000434368 219 ntBASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 SLC25A39P2-201ENST00000537614 270 ntBASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHA4Q9UN74 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
PCDHA4Q9UN74 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms