Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RIMBP3Q9UFD9 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC25.44■■□□□ 1.66
RIMBP3Q9UFD9 AP001582.1-201ENST00000525856 295 ntBASIC25.44■■□□□ 1.66
RIMBP3Q9UFD9 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC25.44■■□□□ 1.66
RIMBP3Q9UFD9 PAM16-215ENST00000577031 548 ntTSL 4 BASIC25.44■■□□□ 1.66
RIMBP3Q9UFD9 RN7SL713P-201ENST00000582127 302 ntBASIC25.44■■□□□ 1.66
RIMBP3Q9UFD9 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC25.44■■□□□ 1.66
RIMBP3Q9UFD9 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RIMBP3Q9UFD9 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RIMBP3Q9UFD9 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC25.44■■□□□ 1.66
RIMBP3Q9UFD9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
RIMBP3Q9UFD9 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
RIMBP3Q9UFD9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RIMBP3Q9UFD9 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RIMBP3Q9UFD9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC25.43■■□□□ 1.66
RIMBP3Q9UFD9 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
RIMBP3Q9UFD9 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RIMBP3Q9UFD9 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
RIMBP3Q9UFD9 MPV17-205ENST00000402310 906 ntTSL 5 BASIC25.43■■□□□ 1.66
RIMBP3Q9UFD9 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC25.43■■□□□ 1.66
RIMBP3Q9UFD9 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RIMBP3Q9UFD9 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC25.43■■□□□ 1.66
RIMBP3Q9UFD9 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
RIMBP3Q9UFD9 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC25.43■■□□□ 1.66
RIMBP3Q9UFD9 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC25.43■■□□□ 1.66
RIMBP3Q9UFD9 AC015910.1-201ENST00000579400 975 ntBASIC25.43■■□□□ 1.66
RIMBP3Q9UFD9 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC25.43■■□□□ 1.66
RIMBP3Q9UFD9 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC25.43■■□□□ 1.66
RIMBP3Q9UFD9 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RIMBP3Q9UFD9 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC25.43■■□□□ 1.66
RIMBP3Q9UFD9 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RIMBP3Q9UFD9 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
RIMBP3Q9UFD9 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
RIMBP3Q9UFD9 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RIMBP3Q9UFD9 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RIMBP3Q9UFD9 PIN4P1-201ENST00000451079 396 ntBASIC25.42■■□□□ 1.66
RIMBP3Q9UFD9 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
RIMBP3Q9UFD9 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RIMBP3Q9UFD9 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC25.42■■□□□ 1.66
RIMBP3Q9UFD9 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC25.42■■□□□ 1.66
RIMBP3Q9UFD9 AL118516.1-201ENST00000564152 670 ntBASIC25.42■■□□□ 1.66
RIMBP3Q9UFD9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RIMBP3Q9UFD9 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RIMBP3Q9UFD9 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC25.42■■□□□ 1.66
RIMBP3Q9UFD9 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RIMBP3Q9UFD9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RIMBP3Q9UFD9 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RIMBP3Q9UFD9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC25.42■■□□□ 1.66
RIMBP3Q9UFD9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
RIMBP3Q9UFD9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RIMBP3Q9UFD9 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RIMBP3Q9UFD9 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
RIMBP3Q9UFD9 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC25.41■■□□□ 1.66
RIMBP3Q9UFD9 AC020922.3-201ENST00000595064 547 ntBASIC25.41■■□□□ 1.66
RIMBP3Q9UFD9 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC25.41■■□□□ 1.66
RIMBP3Q9UFD9 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RIMBP3Q9UFD9 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RIMBP3Q9UFD9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC25.41■■□□□ 1.66
RIMBP3Q9UFD9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RIMBP3Q9UFD9 AC093525.9-201ENST00000624961 1746 ntBASIC25.41■■□□□ 1.66
RIMBP3Q9UFD9 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RIMBP3Q9UFD9 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
RIMBP3Q9UFD9 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RIMBP3Q9UFD9 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC25.41■■□□□ 1.66
RIMBP3Q9UFD9 AC011742.3-201ENST00000439053 820 ntBASIC25.41■■□□□ 1.66
RIMBP3Q9UFD9 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC25.41■■□□□ 1.66
RIMBP3Q9UFD9 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC25.41■■□□□ 1.66
RIMBP3Q9UFD9 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC25.41■■□□□ 1.66
RIMBP3Q9UFD9 AC022748.3-201ENST00000621828 275 ntBASIC25.41■■□□□ 1.66
RIMBP3Q9UFD9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RIMBP3Q9UFD9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RIMBP3Q9UFD9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RIMBP3Q9UFD9 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC25.4■■□□□ 1.66
RIMBP3Q9UFD9 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RIMBP3Q9UFD9 AC006277.1-201ENST00000624348 1610 ntBASIC25.4■■□□□ 1.66
RIMBP3Q9UFD9 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RIMBP3Q9UFD9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RIMBP3Q9UFD9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RIMBP3Q9UFD9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
RIMBP3Q9UFD9 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RIMBP3Q9UFD9 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC25.4■■□□□ 1.66
RIMBP3Q9UFD9 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RIMBP3Q9UFD9 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC25.4■■□□□ 1.66
RIMBP3Q9UFD9 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RIMBP3Q9UFD9 AC012044.1-201ENST00000603431 297 ntBASIC25.4■■□□□ 1.66
RIMBP3Q9UFD9 AC006453.1-201ENST00000636037 1257 ntBASIC25.4■■□□□ 1.66
RIMBP3Q9UFD9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC25.4■■□□□ 1.66
RIMBP3Q9UFD9 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RIMBP3Q9UFD9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.66
RIMBP3Q9UFD9 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
RIMBP3Q9UFD9 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
RIMBP3Q9UFD9 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC25.39■■□□□ 1.66
RIMBP3Q9UFD9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC25.39■■□□□ 1.66
RIMBP3Q9UFD9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
RIMBP3Q9UFD9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC25.39■■□□□ 1.66
RIMBP3Q9UFD9 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
RIMBP3Q9UFD9 SLC16A6P1-201ENST00000413214 1059 ntBASIC25.39■■□□□ 1.66
RIMBP3Q9UFD9 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC25.39■■□□□ 1.66
RIMBP3Q9UFD9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC25.39■■□□□ 1.66
RIMBP3Q9UFD9 RELA-227ENST00000615805 2236 ntTSL 5 BASIC25.39■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms