Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 KC6-207ENST00000600644 2311 ntTSL 3 BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 AL118508.1-201ENST00000613502 2345 ntBASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 PCGF3-213ENST00000620529 1899 ntBASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 AC092364.2-201ENST00000596710 2692 ntBASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 AL355306.1-201ENST00000415580 579 ntBASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 AL161645.1-201ENST00000622716 1255 ntBASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 PCDH8P1-201ENST00000428983 2773 ntBASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 AL513477.1-201ENST00000602865 2407 ntBASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.94■□□□□ 0.14
CUEDC1Q9NWM3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 ADH5P3-201ENST00000433842 1137 ntBASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms