Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 TOP3BP1-201ENST00000420768 1380 ntBASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 AL596087.1-201ENST00000400979 1969 ntBASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 RPS2P1-201ENST00000434010 821 ntBASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.75□□□□□ -0.21
LIN7CQ9NUP9 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 AL031284.1-201ENST00000419297 478 ntBASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 AC026396.1-201ENST00000419388 421 ntBASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 AP001005.1-201ENST00000571755 1248 ntBASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 SLC25A6P4-201ENST00000586535 553 ntBASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 AL139424.1-201ENST00000607572 797 ntBASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms