Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 AC026120.1-201ENST00000611536 926 ntBASIC17.34■□□□□ 0.37
LHX5Q9H2C1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.34■□□□□ 0.37
LHX5Q9H2C1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LHX5Q9H2C1 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LHX5Q9H2C1 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
LHX5Q9H2C1 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LHX5Q9H2C1 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.33■□□□□ 0.37
LHX5Q9H2C1 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LHX5Q9H2C1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LHX5Q9H2C1 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.33■□□□□ 0.37
LHX5Q9H2C1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LHX5Q9H2C1 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LHX5Q9H2C1 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LHX5Q9H2C1 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LHX5Q9H2C1 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LHX5Q9H2C1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LHX5Q9H2C1 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LHX5Q9H2C1 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LHX5Q9H2C1 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.33■□□□□ 0.36
LHX5Q9H2C1 AC254562.1-201ENST00000417586 456 ntBASIC17.33■□□□□ 0.36
LHX5Q9H2C1 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
LHX5Q9H2C1 CEND1P1-201ENST00000451006 455 ntBASIC17.33■□□□□ 0.36
LHX5Q9H2C1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.33■□□□□ 0.36
LHX5Q9H2C1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.33■□□□□ 0.36
LHX5Q9H2C1 AC105233.2-201ENST00000523697 349 ntBASIC17.33■□□□□ 0.36
LHX5Q9H2C1 AF228730.5-201ENST00000530288 346 ntBASIC17.33■□□□□ 0.36
LHX5Q9H2C1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.33■□□□□ 0.36
LHX5Q9H2C1 LINC01225-203ENST00000563550 1244 ntBASIC17.33■□□□□ 0.36
LHX5Q9H2C1 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.33■□□□□ 0.36
LHX5Q9H2C1 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LHX5Q9H2C1 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.33■□□□□ 0.36
LHX5Q9H2C1 ELL2P1-201ENST00000413990 1906 ntBASIC17.33■□□□□ 0.36
LHX5Q9H2C1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.33■□□□□ 0.36
LHX5Q9H2C1 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 AC027307.2-201ENST00000591252 911 ntBASIC17.32■□□□□ 0.36
LHX5Q9H2C1 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 AL365330.1-201ENST00000607459 531 ntBASIC17.32■□□□□ 0.36
LHX5Q9H2C1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.32■□□□□ 0.36
LHX5Q9H2C1 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 MIR346-201ENST00000362234 95 ntBASIC17.31■□□□□ 0.36
LHX5Q9H2C1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 SPDYE11-202ENST00000450699 704 ntBASIC17.31■□□□□ 0.36
LHX5Q9H2C1 AC098859.1-201ENST00000502915 1238 ntBASIC17.31■□□□□ 0.36
LHX5Q9H2C1 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 KRT8P48-201ENST00000515599 1220 ntBASIC17.31■□□□□ 0.36
LHX5Q9H2C1 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 SPDYE9P-201ENST00000570642 692 ntBASIC17.31■□□□□ 0.36
LHX5Q9H2C1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.31■□□□□ 0.36
LHX5Q9H2C1 SPDYE10P-202ENST00000612005 668 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms