Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
TM9SF2Q99805 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TM9SF2Q99805 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.36■□□□□ 0.05
TM9SF2Q99805 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.36■□□□□ 0.05
TM9SF2Q99805 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
TM9SF2Q99805 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TM9SF2Q99805 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.36■□□□□ 0.05
TM9SF2Q99805 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TM9SF2Q99805 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
TM9SF2Q99805 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TM9SF2Q99805 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TM9SF2Q99805 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
TM9SF2Q99805 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TM9SF2Q99805 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.36■□□□□ 0.05
TM9SF2Q99805 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.36■□□□□ 0.05
TM9SF2Q99805 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.36■□□□□ 0.05
TM9SF2Q99805 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.36■□□□□ 0.05
TM9SF2Q99805 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.36■□□□□ 0.05
TM9SF2Q99805 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.36■□□□□ 0.05
TM9SF2Q99805 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.36■□□□□ 0.05
TM9SF2Q99805 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TM9SF2Q99805 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TM9SF2Q99805 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
TM9SF2Q99805 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.36■□□□□ 0.05
TM9SF2Q99805 PI4KAP1-204ENST00000612579 1703 ntBASIC15.36■□□□□ 0.05
TM9SF2Q99805 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TM9SF2Q99805 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.36■□□□□ 0.05
TM9SF2Q99805 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.36■□□□□ 0.05
TM9SF2Q99805 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TM9SF2Q99805 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TM9SF2Q99805 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.36■□□□□ 0.05
TM9SF2Q99805 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TM9SF2Q99805 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.36■□□□□ 0.05
TM9SF2Q99805 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TM9SF2Q99805 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.36■□□□□ 0.05
TM9SF2Q99805 AC105917.1-201ENST00000506637 2539 ntBASIC15.36■□□□□ 0.05
TM9SF2Q99805 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF2Q99805 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
TM9SF2Q99805 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF2Q99805 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF2Q99805 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TM9SF2Q99805 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF2Q99805 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF2Q99805 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF2Q99805 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF2Q99805 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF2Q99805 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF2Q99805 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TM9SF2Q99805 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
TM9SF2Q99805 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.35■□□□□ 0.05
TM9SF2Q99805 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF2Q99805 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF2Q99805 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.35■□□□□ 0.05
TM9SF2Q99805 YBX2P1-201ENST00000394192 760 ntBASIC15.35■□□□□ 0.05
TM9SF2Q99805 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.35■□□□□ 0.05
TM9SF2Q99805 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF2Q99805 HCG4B-203ENST00000450128 991 ntBASIC15.35■□□□□ 0.05
TM9SF2Q99805 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.35■□□□□ 0.05
TM9SF2Q99805 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.35■□□□□ 0.05
TM9SF2Q99805 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.35■□□□□ 0.05
TM9SF2Q99805 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF2Q99805 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
TM9SF2Q99805 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.35■□□□□ 0.05
TM9SF2Q99805 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.35■□□□□ 0.05
TM9SF2Q99805 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.35■□□□□ 0.05
TM9SF2Q99805 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF2Q99805 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF2Q99805 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF2Q99805 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.35■□□□□ 0.05
TM9SF2Q99805 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
TM9SF2Q99805 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF2Q99805 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF2Q99805 AL590787.1-201ENST00000568856 1315 ntBASIC15.35■□□□□ 0.05
TM9SF2Q99805 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TM9SF2Q99805 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF2Q99805 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF2Q99805 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF2Q99805 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.35■□□□□ 0.05
TM9SF2Q99805 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TM9SF2Q99805 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF2Q99805 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TM9SF2Q99805 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TM9SF2Q99805 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF2Q99805 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.34■□□□□ 0.05
TM9SF2Q99805 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF2Q99805 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF2Q99805 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF2Q99805 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF2Q99805 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF2Q99805 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TM9SF2Q99805 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF2Q99805 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.34■□□□□ 0.05
TM9SF2Q99805 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.34■□□□□ 0.05
TM9SF2Q99805 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF2Q99805 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF2Q99805 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.34■□□□□ 0.05
TM9SF2Q99805 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TM9SF2Q99805 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.34■□□□□ 0.05
TM9SF2Q99805 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.34■□□□□ 0.05
TM9SF2Q99805 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms