Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.84□□□□□ -0.03
PTP4A1Q93096 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTP4A1Q93096 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.84□□□□□ -0.03
PTP4A1Q93096 FAM197Y8-203ENST00000450145 560 ntBASIC14.84□□□□□ -0.03
PTP4A1Q93096 AC073648.2-201ENST00000510116 352 ntBASIC14.84□□□□□ -0.03
PTP4A1Q93096 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.84□□□□□ -0.03
PTP4A1Q93096 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTP4A1Q93096 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.84□□□□□ -0.03
PTP4A1Q93096 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTP4A1Q93096 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PTP4A1Q93096 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PTP4A1Q93096 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTP4A1Q93096 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.84□□□□□ -0.03
PTP4A1Q93096 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTP4A1Q93096 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTP4A1Q93096 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTP4A1Q93096 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PTP4A1Q93096 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PTP4A1Q93096 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
PTP4A1Q93096 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
PTP4A1Q93096 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
PTP4A1Q93096 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.83□□□□□ -0.03
PTP4A1Q93096 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTP4A1Q93096 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTP4A1Q93096 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTP4A1Q93096 LINC02447-202ENST00000501888 2146 ntBASIC14.83□□□□□ -0.04
PTP4A1Q93096 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTP4A1Q93096 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PTP4A1Q93096 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 RNPS1P1-201ENST00000507437 918 ntBASIC14.83□□□□□ -0.04
PTP4A1Q93096 AC087641.1-201ENST00000557561 1021 ntBASIC14.83□□□□□ -0.04
PTP4A1Q93096 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 AC025062.2-201ENST00000605477 670 ntBASIC14.83□□□□□ -0.04
PTP4A1Q93096 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PTP4A1Q93096 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTP4A1Q93096 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTP4A1Q93096 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTP4A1Q93096 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTP4A1Q93096 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTP4A1Q93096 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTP4A1Q93096 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PTP4A1Q93096 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PTP4A1Q93096 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTP4A1Q93096 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTP4A1Q93096 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 AC104640.1-201ENST00000562617 2109 ntBASIC14.83□□□□□ -0.04
PTP4A1Q93096 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
PTP4A1Q93096 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTP4A1Q93096 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
PTP4A1Q93096 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTP4A1Q93096 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
PTP4A1Q93096 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTP4A1Q93096 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.82□□□□□ -0.04
PTP4A1Q93096 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTP4A1Q93096 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTP4A1Q93096 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTP4A1Q93096 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.82□□□□□ -0.04
PTP4A1Q93096 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.82□□□□□ -0.04
PTP4A1Q93096 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.82□□□□□ -0.04
PTP4A1Q93096 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.82□□□□□ -0.04
PTP4A1Q93096 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.82□□□□□ -0.04
PTP4A1Q93096 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.82□□□□□ -0.04
PTP4A1Q93096 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PTP4A1Q93096 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.82□□□□□ -0.04
PTP4A1Q93096 RPS2P28-201ENST00000314255 741 ntBASIC14.82□□□□□ -0.04
PTP4A1Q93096 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PTP4A1Q93096 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.82□□□□□ -0.04
PTP4A1Q93096 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.82□□□□□ -0.04
PTP4A1Q93096 ELK2BP-201ENST00000415014 1224 ntBASIC14.82□□□□□ -0.04
PTP4A1Q93096 AF186996.4-201ENST00000467186 377 ntBASIC14.82□□□□□ -0.04
PTP4A1Q93096 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.82□□□□□ -0.04
PTP4A1Q93096 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTP4A1Q93096 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.82□□□□□ -0.04
PTP4A1Q93096 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PTP4A1Q93096 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.82□□□□□ -0.04
PTP4A1Q93096 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PTP4A1Q93096 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PTP4A1Q93096 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms