Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AC092337.1-201ENST00000568699 1129 ntBASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 AC074044.1-201ENST00000609673 707 ntBASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAPGEF4Q8WZA2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.39■■□□□ 1.02
RAPGEF4Q8WZA2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RAPGEF4Q8WZA2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
RAPGEF4Q8WZA2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RAPGEF4Q8WZA2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RAPGEF4Q8WZA2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RAPGEF4Q8WZA2 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.01
RAPGEF4Q8WZA2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RAPGEF4Q8WZA2 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC21.39■■□□□ 1.01
RAPGEF4Q8WZA2 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC21.39■■□□□ 1.01
RAPGEF4Q8WZA2 AC098850.1-201ENST00000419919 790 ntBASIC21.39■■□□□ 1.01
RAPGEF4Q8WZA2 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC21.39■■□□□ 1.01
RAPGEF4Q8WZA2 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC21.39■■□□□ 1.01
RAPGEF4Q8WZA2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC21.39■■□□□ 1.01
RAPGEF4Q8WZA2 NEU3-203ENST00000529024 581 ntTSL 3 BASIC21.39■■□□□ 1.01
RAPGEF4Q8WZA2 PAM16-215ENST00000577031 548 ntTSL 4 BASIC21.39■■□□□ 1.01
RAPGEF4Q8WZA2 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
RAPGEF4Q8WZA2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RAPGEF4Q8WZA2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.01
RAPGEF4Q8WZA2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.01
RAPGEF4Q8WZA2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RAPGEF4Q8WZA2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RAPGEF4Q8WZA2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RAPGEF4Q8WZA2 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RAPGEF4Q8WZA2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RAPGEF4Q8WZA2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RAPGEF4Q8WZA2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 FADS2-205ENST00000517839 469 ntTSL 3 BASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 AC025048.3-201ENST00000590609 569 ntBASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 APOC4-201ENST00000591600 348 ntTSL 3 BASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 AC005702.4-201ENST00000618393 416 ntBASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 AC005622.1-201ENST00000636801 1703 ntBASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RAPGEF4Q8WZA2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 MIR658-201ENST00000385210 100 ntBASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 RPS2P32-201ENST00000439199 892 ntBASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 TIMM17BP1-201ENST00000545713 516 ntBASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 AL365330.1-201ENST00000607459 531 ntBASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAPGEF4Q8WZA2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC21.36■■□□□ 1.01
RAPGEF4Q8WZA2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAPGEF4Q8WZA2 AL136982.4-201ENST00000437689 1740 ntBASIC21.36■■□□□ 1.01
RAPGEF4Q8WZA2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAPGEF4Q8WZA2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms