Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NUP43Q8NFH3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
NUP43Q8NFH3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
NUP43Q8NFH3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NUP43Q8NFH3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.44■□□□□ 0.06
NUP43Q8NFH3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NUP43Q8NFH3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.44■□□□□ 0.06
NUP43Q8NFH3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NUP43Q8NFH3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NUP43Q8NFH3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.44■□□□□ 0.06
NUP43Q8NFH3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NUP43Q8NFH3 REXO1L8P-201ENST00000604378 1897 ntBASIC15.44■□□□□ 0.06
NUP43Q8NFH3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
NUP43Q8NFH3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 AC005622.1-201ENST00000636801 1703 ntBASIC15.43■□□□□ 0.06
NUP43Q8NFH3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.43■□□□□ 0.06
NUP43Q8NFH3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 KRT19P2-202ENST00000557173 1012 ntBASIC15.43■□□□□ 0.06
NUP43Q8NFH3 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 AL009183.1-201ENST00000603760 355 ntBASIC15.43■□□□□ 0.06
NUP43Q8NFH3 AC120114.3-201ENST00000611923 658 ntBASIC15.43■□□□□ 0.06
NUP43Q8NFH3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NUP43Q8NFH3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 AC026396.1-201ENST00000419388 421 ntBASIC15.42■□□□□ 0.06
NUP43Q8NFH3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.42■□□□□ 0.06
NUP43Q8NFH3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 SLC25A1P1-201ENST00000528351 927 ntBASIC15.42■□□□□ 0.06
NUP43Q8NFH3 AC109635.5-201ENST00000533593 962 ntBASIC15.42■□□□□ 0.06
NUP43Q8NFH3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NUP43Q8NFH3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms