Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.09■□□□□ 0.17
HIPK4Q8NE63 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIPK4Q8NE63 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
HIPK4Q8NE63 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.09■□□□□ 0.17
HIPK4Q8NE63 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIPK4Q8NE63 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIPK4Q8NE63 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIPK4Q8NE63 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HIPK4Q8NE63 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.08■□□□□ 0.17
HIPK4Q8NE63 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HIPK4Q8NE63 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.08■□□□□ 0.17
HIPK4Q8NE63 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
HIPK4Q8NE63 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HIPK4Q8NE63 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIPK4Q8NE63 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 OR2I1P-210ENST00000642037 4691 ntBASIC16.07■□□□□ 0.16
HIPK4Q8NE63 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 KLF4P1-201ENST00000412782 1185 ntBASIC16.07■□□□□ 0.16
HIPK4Q8NE63 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 AC011467.2-201ENST00000598425 242 ntBASIC16.07■□□□□ 0.16
HIPK4Q8NE63 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 AC099063.4-201ENST00000641099 1602 ntBASIC16.07■□□□□ 0.16
HIPK4Q8NE63 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIPK4Q8NE63 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms