Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
SIX5Q8N196 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX5Q8N196 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX5Q8N196 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX5Q8N196 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX5Q8N196 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SIX5Q8N196 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.84■□□□□ 0.29
SIX5Q8N196 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.84■□□□□ 0.29
SIX5Q8N196 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.84■□□□□ 0.29
SIX5Q8N196 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SIX5Q8N196 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SIX5Q8N196 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.84■□□□□ 0.29
SIX5Q8N196 MIR4492-201ENST00000581627 80 ntBASIC16.84■□□□□ 0.29
SIX5Q8N196 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX5Q8N196 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX5Q8N196 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX5Q8N196 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX5Q8N196 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
SIX5Q8N196 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.84■□□□□ 0.29
SIX5Q8N196 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX5Q8N196 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SIX5Q8N196 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.84■□□□□ 0.29
SIX5Q8N196 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.84■□□□□ 0.29
SIX5Q8N196 AC009113.1-201ENST00000570267 2443 ntBASIC16.84■□□□□ 0.29
SIX5Q8N196 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.83■□□□□ 0.29
SIX5Q8N196 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
SIX5Q8N196 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SIX5Q8N196 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
SIX5Q8N196 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SIX5Q8N196 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SIX5Q8N196 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SIX5Q8N196 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SIX5Q8N196 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.83■□□□□ 0.28
SIX5Q8N196 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.83■□□□□ 0.28
SIX5Q8N196 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SIX5Q8N196 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.83■□□□□ 0.28
SIX5Q8N196 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SIX5Q8N196 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.83■□□□□ 0.28
SIX5Q8N196 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.83■□□□□ 0.28
SIX5Q8N196 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.83■□□□□ 0.28
SIX5Q8N196 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
SIX5Q8N196 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SIX5Q8N196 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.83■□□□□ 0.28
SIX5Q8N196 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.83■□□□□ 0.28
SIX5Q8N196 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SIX5Q8N196 TPRX2P-201ENST00000535362 881 ntBASIC16.83■□□□□ 0.28
SIX5Q8N196 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.83■□□□□ 0.28
SIX5Q8N196 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SIX5Q8N196 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
SIX5Q8N196 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.83■□□□□ 0.28
SIX5Q8N196 AL133338.1-201ENST00000565695 1517 ntBASIC16.83■□□□□ 0.28
SIX5Q8N196 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SIX5Q8N196 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.83■□□□□ 0.28
SIX5Q8N196 CTBP2P3-201ENST00000585629 1255 ntBASIC16.83■□□□□ 0.28
SIX5Q8N196 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.83■□□□□ 0.28
SIX5Q8N196 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.83■□□□□ 0.28
SIX5Q8N196 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.83■□□□□ 0.28
SIX5Q8N196 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SIX5Q8N196 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SIX5Q8N196 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.83■□□□□ 0.28
SIX5Q8N196 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SIX5Q8N196 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.82■□□□□ 0.28
SIX5Q8N196 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX5Q8N196 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SIX5Q8N196 MST1L-201ENST00000442552 2185 ntBASIC16.82■□□□□ 0.28
SIX5Q8N196 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX5Q8N196 AC090164.3-201ENST00000610780 2143 ntBASIC16.82■□□□□ 0.28
SIX5Q8N196 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX5Q8N196 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX5Q8N196 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SIX5Q8N196 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX5Q8N196 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SIX5Q8N196 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX5Q8N196 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SIX5Q8N196 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX5Q8N196 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SIX5Q8N196 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX5Q8N196 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SIX5Q8N196 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
SIX5Q8N196 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
SIX5Q8N196 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.82■□□□□ 0.28
SIX5Q8N196 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.82■□□□□ 0.28
SIX5Q8N196 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.82■□□□□ 0.28
SIX5Q8N196 AC114501.2-201ENST00000439631 535 ntBASIC16.82■□□□□ 0.28
SIX5Q8N196 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX5Q8N196 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.82■□□□□ 0.28
SIX5Q8N196 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.82■□□□□ 0.28
SIX5Q8N196 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SIX5Q8N196 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX5Q8N196 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.82■□□□□ 0.28
SIX5Q8N196 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.82■□□□□ 0.28
SIX5Q8N196 SRD5A3P1-201ENST00000603021 949 ntBASIC16.82■□□□□ 0.28
SIX5Q8N196 MIR6775-201ENST00000617557 69 ntBASIC16.82■□□□□ 0.28
SIX5Q8N196 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.82■□□□□ 0.28
SIX5Q8N196 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX5Q8N196 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.82■□□□□ 0.28
SIX5Q8N196 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX5Q8N196 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.82■□□□□ 0.28
SIX5Q8N196 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX5Q8N196 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms