Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.31■□□□□ 0.36
SCUBE3Q8IX30 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 PRYP6-201ENST00000514804 343 ntBASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 LINC01225-203ENST00000563550 1244 ntBASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 AC027307.2-201ENST00000591252 911 ntBASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 AC022145.2-201ENST00000598203 171 ntBASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCUBE3Q8IX30 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 AC004461.1-201ENST00000412461 403 ntBASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 AL592309.1-201ENST00000443127 649 ntBASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 AC093724.1-201ENST00000448659 1027 ntBASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 POU5F1P6-201ENST00000466990 990 ntBASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 AC008267.7-201ENST00000624570 1194 ntBASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 AL513210.1-201ENST00000629608 234 ntBASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms