Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 AC044860.1-202ENST00000559481 777 ntBASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 AC055876.2-201ENST00000531834 546 ntBASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.92□□□□□ -0.18
RAI1Q7Z5J4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 SPDYE19P-201ENST00000338590 713 ntBASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 KRT17P7-201ENST00000451704 1104 ntBASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 AC093004.1-201ENST00000508850 424 ntBASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 AC138969.3-201ENST00000546612 1459 ntBASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 AC138932.2-201ENST00000548268 1459 ntBASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 AC126755.4-201ENST00000549796 1459 ntBASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.91□□□□□ -0.18
RAI1Q7Z5J4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 AL008721.1-201ENST00000609964 604 ntBASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 GGT3P-204ENST00000453783 1664 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms