Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DCLRE1AQ6PJP8 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DCLRE1AQ6PJP8 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DCLRE1AQ6PJP8 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
DCLRE1AQ6PJP8 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DCLRE1AQ6PJP8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.52■□□□□ 0.4
DCLRE1AQ6PJP8 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.52■□□□□ 0.4
DCLRE1AQ6PJP8 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.52■□□□□ 0.4
DCLRE1AQ6PJP8 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.52■□□□□ 0.4
DCLRE1AQ6PJP8 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
DCLRE1AQ6PJP8 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.52■□□□□ 0.4
DCLRE1AQ6PJP8 AC061975.2-201ENST00000581722 295 ntBASIC17.52■□□□□ 0.4
DCLRE1AQ6PJP8 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.52■□□□□ 0.4
DCLRE1AQ6PJP8 AC008761.3-201ENST00000624803 892 ntBASIC17.52■□□□□ 0.4
DCLRE1AQ6PJP8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DCLRE1AQ6PJP8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
DCLRE1AQ6PJP8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
DCLRE1AQ6PJP8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DCLRE1AQ6PJP8 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
DCLRE1AQ6PJP8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
DCLRE1AQ6PJP8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.52■□□□□ 0.39
DCLRE1AQ6PJP8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
DCLRE1AQ6PJP8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
DCLRE1AQ6PJP8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
DCLRE1AQ6PJP8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
DCLRE1AQ6PJP8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.52■□□□□ 0.39
DCLRE1AQ6PJP8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.52■□□□□ 0.39
DCLRE1AQ6PJP8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 AC011270.2-201ENST00000624293 2550 ntBASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 RPL37AP1-201ENST00000412502 279 ntBASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 MRPS18AP1-201ENST00000414458 589 ntBASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 GGT3P-204ENST00000453783 1664 ntBASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
DCLRE1AQ6PJP8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 AC005622.1-201ENST00000636801 1703 ntBASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 AL079307.3-201ENST00000556114 283 ntBASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 TEX28P1-201ENST00000613479 1221 ntBASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 TEX28P2-201ENST00000617764 1221 ntBASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DCLRE1AQ6PJP8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms