Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 AL162726.2-201ENST00000438986 1017 ntBASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 U82695.1-201ENST00000635752 1889 ntBASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 AC005622.1-201ENST00000636801 1703 ntBASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 AC006538.1-201ENST00000567905 1585 ntBASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 AL442647.2-201ENST00000429864 857 ntBASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 SLC25A47P1-201ENST00000531577 414 ntBASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 AL391069.4-201ENST00000609583 481 ntBASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.5■□□□□ 0.39
CNKSR3Q6P9H4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 KRT8P22-201ENST00000562317 1415 ntBASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 ACTBP11-201ENST00000436287 1126 ntBASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 AC245100.3-201ENST00000441281 285 ntBASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 MIR4538-201ENST00000581377 78 ntBASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CNKSR3Q6P9H4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms