Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.07■□□□□ 0.32
LRRC38Q5VT99 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LRRC38Q5VT99 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 AC025580.3-201ENST00000617932 1424 ntBASIC17.06■□□□□ 0.32
LRRC38Q5VT99 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 AC245100.5-201ENST00000452108 331 ntBASIC17.06■□□□□ 0.32
LRRC38Q5VT99 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 AL365330.1-201ENST00000607459 531 ntBASIC17.06■□□□□ 0.32
LRRC38Q5VT99 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 AC004877.2-201ENST00000623941 599 ntBASIC17.06■□□□□ 0.32
LRRC38Q5VT99 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.06■□□□□ 0.32
LRRC38Q5VT99 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC38Q5VT99 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 KRT19P2-202ENST00000557173 1012 ntBASIC17.05■□□□□ 0.32
LRRC38Q5VT99 AC064836.3-201ENST00000607928 673 ntBASIC17.05■□□□□ 0.32
LRRC38Q5VT99 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms