Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 AL442647.2-201ENST00000429864 857 ntBASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 AC008687.7-202ENST00000637404 953 ntBASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
VPS13DQ5THJ4 AP001094.4-201ENST00000579008 2176 ntBASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 AC005622.1-201ENST00000636801 1703 ntBASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 PCGF3-213ENST00000620529 1899 ntBASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 AC004987.2-201ENST00000395959 1148 ntBASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 TDH-203ENST00000531764 1110 ntBASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 AC000095.1-201ENST00000603208 874 ntBASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 HLA-DPB2-205ENST00000435074 1188 ntBASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 VDAC1P7-201ENST00000462417 847 ntBASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 AC026410.3-201ENST00000514280 936 ntBASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 HNRNPUP1-201ENST00000554987 333 ntBASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC10.84□□□□□ -0.67
VPS13DQ5THJ4 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
VPS13DQ5THJ4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
VPS13DQ5THJ4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC10.83□□□□□ -0.67
VPS13DQ5THJ4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC10.83□□□□□ -0.68
VPS13DQ5THJ4 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms