Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 AC006449.5-201ENST00000610658 2098 ntBASIC18.42■□□□□ 0.54
HERC4Q5GLZ8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 PMS2P4-201ENST00000412466 1052 ntBASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 AC004449.1-201ENST00000564240 433 ntBASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 AC021097.1-201ENST00000607902 574 ntBASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HERC4Q5GLZ8 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 PCGF3-213ENST00000620529 1899 ntBASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 MIR3909-201ENST00000579518 119 ntBASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC4Q5GLZ8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
HERC4Q5GLZ8 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
HERC4Q5GLZ8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.54
HERC4Q5GLZ8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
HERC4Q5GLZ8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 GK-202ENST00000378941 458 ntTSL 3 BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 ACTG1P14-201ENST00000446382 1122 ntBASIC18.39■□□□□ 0.53
HERC4Q5GLZ8 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms