Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGCS1Q01581 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.91■□□□□ 0.14
HMGCS1Q01581 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCS1Q01581 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.91■□□□□ 0.14
HMGCS1Q01581 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGCS1Q01581 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
HMGCS1Q01581 AC009078.2-202ENST00000463353 338 ntBASIC15.91■□□□□ 0.14
HMGCS1Q01581 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.91■□□□□ 0.14
HMGCS1Q01581 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
HMGCS1Q01581 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGCS1Q01581 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGCS1Q01581 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
HMGCS1Q01581 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
HMGCS1Q01581 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCS1Q01581 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.91■□□□□ 0.14
HMGCS1Q01581 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HMGCS1Q01581 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HMGCS1Q01581 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCS1Q01581 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
HMGCS1Q01581 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCS1Q01581 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCS1Q01581 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCS1Q01581 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCS1Q01581 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGCS1Q01581 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.9■□□□□ 0.14
HMGCS1Q01581 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HMGCS1Q01581 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCS1Q01581 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.9■□□□□ 0.14
HMGCS1Q01581 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.9■□□□□ 0.14
HMGCS1Q01581 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCS1Q01581 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCS1Q01581 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCS1Q01581 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCS1Q01581 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCS1Q01581 MRPL3P1-201ENST00000400109 1033 ntBASIC15.9■□□□□ 0.14
HMGCS1Q01581 AL031284.1-201ENST00000419297 478 ntBASIC15.9■□□□□ 0.14
HMGCS1Q01581 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.9■□□□□ 0.14
HMGCS1Q01581 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.9■□□□□ 0.14
HMGCS1Q01581 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCS1Q01581 AC108751.1-201ENST00000490852 363 ntBASIC15.9■□□□□ 0.14
HMGCS1Q01581 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCS1Q01581 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCS1Q01581 SLC25A6P4-201ENST00000586535 553 ntBASIC15.9■□□□□ 0.14
HMGCS1Q01581 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.9■□□□□ 0.14
HMGCS1Q01581 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.9■□□□□ 0.14
HMGCS1Q01581 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.9■□□□□ 0.14
HMGCS1Q01581 AL773604.1-201ENST00000617417 272 ntBASIC15.9■□□□□ 0.14
HMGCS1Q01581 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.9■□□□□ 0.14
HMGCS1Q01581 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HMGCS1Q01581 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCS1Q01581 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCS1Q01581 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HMGCS1Q01581 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCS1Q01581 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
HMGCS1Q01581 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCS1Q01581 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCS1Q01581 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.9■□□□□ 0.14
HMGCS1Q01581 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.9■□□□□ 0.14
HMGCS1Q01581 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HMGCS1Q01581 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGCS1Q01581 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.9■□□□□ 0.14
HMGCS1Q01581 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.9■□□□□ 0.14
HMGCS1Q01581 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCS1Q01581 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGCS1Q01581 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCS1Q01581 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCS1Q01581 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
HMGCS1Q01581 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
HMGCS1Q01581 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCS1Q01581 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCS1Q01581 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCS1Q01581 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCS1Q01581 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCS1Q01581 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCS1Q01581 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.89■□□□□ 0.13
HMGCS1Q01581 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.89■□□□□ 0.13
HMGCS1Q01581 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.89■□□□□ 0.13
HMGCS1Q01581 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCS1Q01581 AC098831.1-202ENST00000438821 336 ntBASIC15.89■□□□□ 0.13
HMGCS1Q01581 FDX1P1-201ENST00000449115 551 ntBASIC15.89■□□□□ 0.13
HMGCS1Q01581 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
HMGCS1Q01581 CXCL1P1-201ENST00000502804 216 ntBASIC15.89■□□□□ 0.13
HMGCS1Q01581 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
HMGCS1Q01581 AL662844.1-201ENST00000546340 181 ntBASIC15.89■□□□□ 0.13
HMGCS1Q01581 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.89■□□□□ 0.13
HMGCS1Q01581 MIR4515-201ENST00000584082 81 ntBASIC15.89■□□□□ 0.13
HMGCS1Q01581 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.89■□□□□ 0.13
HMGCS1Q01581 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGCS1Q01581 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGCS1Q01581 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGCS1Q01581 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.89■□□□□ 0.13
HMGCS1Q01581 AC020765.3-201ENST00000613051 740 ntBASIC15.89■□□□□ 0.13
HMGCS1Q01581 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCS1Q01581 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGCS1Q01581 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCS1Q01581 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.89■□□□□ 0.13
HMGCS1Q01581 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
HMGCS1Q01581 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HMGCS1Q01581 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HMGCS1Q01581 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms