Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
WNT3P56703 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
WNT3P56703 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
WNT3P56703 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.58■□□□□ 0.08
WNT3P56703 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
WNT3P56703 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.58■□□□□ 0.08
WNT3P56703 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
WNT3P56703 PRSS29P-201ENST00000440800 595 ntBASIC15.58■□□□□ 0.08
WNT3P56703 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
WNT3P56703 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.58■□□□□ 0.08
WNT3P56703 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
WNT3P56703 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.58■□□□□ 0.08
WNT3P56703 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.58■□□□□ 0.08
WNT3P56703 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.58■□□□□ 0.08
WNT3P56703 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
WNT3P56703 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
WNT3P56703 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
WNT3P56703 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
WNT3P56703 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
WNT3P56703 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
WNT3P56703 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
WNT3P56703 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
WNT3P56703 AP005117.1-202ENST00000581724 1908 ntBASIC15.58■□□□□ 0.08
WNT3P56703 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.58■□□□□ 0.08
WNT3P56703 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
WNT3P56703 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.58■□□□□ 0.08
WNT3P56703 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.58■□□□□ 0.08
WNT3P56703 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.58■□□□□ 0.08
WNT3P56703 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
WNT3P56703 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
WNT3P56703 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
WNT3P56703 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.57■□□□□ 0.08
WNT3P56703 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
WNT3P56703 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.57■□□□□ 0.08
WNT3P56703 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
WNT3P56703 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
WNT3P56703 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
WNT3P56703 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
WNT3P56703 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
WNT3P56703 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
WNT3P56703 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
WNT3P56703 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.57■□□□□ 0.08
WNT3P56703 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
WNT3P56703 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
WNT3P56703 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
WNT3P56703 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.57■□□□□ 0.08
WNT3P56703 MIR1233-2-201ENST00000408138 82 ntBASIC15.57■□□□□ 0.08
WNT3P56703 MIR1233-1-201ENST00000408722 82 ntBASIC15.57■□□□□ 0.08
WNT3P56703 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.57■□□□□ 0.08
WNT3P56703 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.57■□□□□ 0.08
WNT3P56703 AC108751.1-201ENST00000490852 363 ntBASIC15.57■□□□□ 0.08
WNT3P56703 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.57■□□□□ 0.08
WNT3P56703 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.57■□□□□ 0.08
WNT3P56703 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.57■□□□□ 0.08
WNT3P56703 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.57■□□□□ 0.08
WNT3P56703 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
WNT3P56703 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.57■□□□□ 0.08
WNT3P56703 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.57■□□□□ 0.08
WNT3P56703 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
WNT3P56703 AL031055.1-201ENST00000606362 631 ntBASIC15.57■□□□□ 0.08
WNT3P56703 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.57■□□□□ 0.08
WNT3P56703 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
WNT3P56703 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.57■□□□□ 0.08
WNT3P56703 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
WNT3P56703 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
WNT3P56703 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
WNT3P56703 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
WNT3P56703 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
WNT3P56703 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
WNT3P56703 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
WNT3P56703 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
WNT3P56703 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
WNT3P56703 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
WNT3P56703 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
WNT3P56703 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
WNT3P56703 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
WNT3P56703 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
WNT3P56703 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
WNT3P56703 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
WNT3P56703 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
WNT3P56703 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
WNT3P56703 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
WNT3P56703 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
WNT3P56703 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
WNT3P56703 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.56■□□□□ 0.08
WNT3P56703 IGLL3P-201ENST00000412472 434 ntBASIC15.56■□□□□ 0.08
WNT3P56703 AC023274.1-201ENST00000418278 595 ntBASIC15.56■□□□□ 0.08
WNT3P56703 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
WNT3P56703 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.56■□□□□ 0.08
WNT3P56703 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.56■□□□□ 0.08
WNT3P56703 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.56■□□□□ 0.08
WNT3P56703 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.56■□□□□ 0.08
WNT3P56703 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
WNT3P56703 MIR3909-201ENST00000579518 119 ntBASIC15.56■□□□□ 0.08
WNT3P56703 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.56■□□□□ 0.08
WNT3P56703 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.56■□□□□ 0.08
WNT3P56703 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
WNT3P56703 FAM197Y3-203ENST00000618346 717 ntBASIC15.56■□□□□ 0.08
WNT3P56703 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.56■□□□□ 0.08
WNT3P56703 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms