Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.27■□□□□ 0.2
CDKN2DP55273 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.27■□□□□ 0.2
CDKN2DP55273 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKN2DP55273 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDKN2DP55273 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.27■□□□□ 0.19
CDKN2DP55273 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDKN2DP55273 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDKN2DP55273 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.27■□□□□ 0.19
CDKN2DP55273 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDKN2DP55273 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.27■□□□□ 0.19
CDKN2DP55273 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.27■□□□□ 0.19
CDKN2DP55273 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDKN2DP55273 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.27■□□□□ 0.19
CDKN2DP55273 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDKN2DP55273 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.26■□□□□ 0.19
CDKN2DP55273 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDKN2DP55273 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKN2DP55273 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKN2DP55273 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKN2DP55273 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDKN2DP55273 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CDKN2DP55273 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKN2DP55273 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.26■□□□□ 0.19
CDKN2DP55273 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDKN2DP55273 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKN2DP55273 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CDKN2DP55273 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDKN2DP55273 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CDKN2DP55273 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKN2DP55273 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CDKN2DP55273 AL162727.3-201ENST00000635661 2787 ntBASIC16.26■□□□□ 0.19
CDKN2DP55273 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CDKN2DP55273 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.26■□□□□ 0.19
CDKN2DP55273 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.26■□□□□ 0.19
CDKN2DP55273 AC092474.2-201ENST00000424288 719 ntBASIC16.26■□□□□ 0.19
CDKN2DP55273 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.26■□□□□ 0.19
CDKN2DP55273 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.26■□□□□ 0.19
CDKN2DP55273 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.26■□□□□ 0.19
CDKN2DP55273 KRT19P2-202ENST00000557173 1012 ntBASIC16.26■□□□□ 0.19
CDKN2DP55273 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.26■□□□□ 0.19
CDKN2DP55273 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.26■□□□□ 0.19
CDKN2DP55273 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.26■□□□□ 0.19
CDKN2DP55273 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.26■□□□□ 0.19
CDKN2DP55273 AC007064.4-201ENST00000637740 555 ntBASIC16.26■□□□□ 0.19
CDKN2DP55273 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.26■□□□□ 0.19
CDKN2DP55273 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKN2DP55273 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKN2DP55273 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKN2DP55273 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.26■□□□□ 0.19
CDKN2DP55273 AC092919.2-201ENST00000623631 1645 ntBASIC16.26■□□□□ 0.19
CDKN2DP55273 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDKN2DP55273 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.26■□□□□ 0.19
CDKN2DP55273 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKN2DP55273 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKN2DP55273 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDKN2DP55273 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.25■□□□□ 0.19
CDKN2DP55273 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
CDKN2DP55273 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDKN2DP55273 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDKN2DP55273 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
CDKN2DP55273 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDKN2DP55273 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDKN2DP55273 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CDKN2DP55273 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDKN2DP55273 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDKN2DP55273 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CDKN2DP55273 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CDKN2DP55273 AC140658.5-201ENST00000438532 169 ntBASIC16.25■□□□□ 0.19
CDKN2DP55273 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.25■□□□□ 0.19
CDKN2DP55273 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.25■□□□□ 0.19
CDKN2DP55273 SLC25A1P1-201ENST00000528351 927 ntBASIC16.25■□□□□ 0.19
CDKN2DP55273 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.25■□□□□ 0.19
CDKN2DP55273 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDKN2DP55273 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDKN2DP55273 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDKN2DP55273 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CDKN2DP55273 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CDKN2DP55273 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.25■□□□□ 0.19
CDKN2DP55273 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDKN2DP55273 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDKN2DP55273 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDKN2DP55273 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDKN2DP55273 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CDKN2DP55273 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.24■□□□□ 0.19
CDKN2DP55273 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2DP55273 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2DP55273 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CDKN2DP55273 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2DP55273 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2DP55273 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2DP55273 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CDKN2DP55273 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2DP55273 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2DP55273 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2DP55273 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.24■□□□□ 0.19
CDKN2DP55273 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.24■□□□□ 0.19
CDKN2DP55273 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2DP55273 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.24■□□□□ 0.19
CDKN2DP55273 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2DP55273 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms