Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA2D1P54289 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA2D1P54289 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA2D1P54289 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA2D1P54289 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA2D1P54289 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA2D1P54289 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.46■□□□□ 0.39
CACNA2D1P54289 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA2D1P54289 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.46■□□□□ 0.39
CACNA2D1P54289 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.46■□□□□ 0.39
CACNA2D1P54289 AC142381.1-201ENST00000426099 345 ntBASIC17.46■□□□□ 0.39
CACNA2D1P54289 RFPL4AP1-201ENST00000530883 850 ntBASIC17.46■□□□□ 0.39
CACNA2D1P54289 KRT8P23-201ENST00000560090 1207 ntBASIC17.46■□□□□ 0.39
CACNA2D1P54289 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.46■□□□□ 0.39
CACNA2D1P54289 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.46■□□□□ 0.39
CACNA2D1P54289 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA2D1P54289 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.46■□□□□ 0.39
CACNA2D1P54289 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.46■□□□□ 0.39
CACNA2D1P54289 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.46■□□□□ 0.39
CACNA2D1P54289 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.46■□□□□ 0.39
CACNA2D1P54289 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
CACNA2D1P54289 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.46■□□□□ 0.39
CACNA2D1P54289 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA2D1P54289 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.46■□□□□ 0.39
CACNA2D1P54289 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.46■□□□□ 0.39
CACNA2D1P54289 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CACNA2D1P54289 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA2D1P54289 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.46■□□□□ 0.39
CACNA2D1P54289 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA2D1P54289 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA2D1P54289 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CACNA2D1P54289 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.46■□□□□ 0.39
CACNA2D1P54289 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
CACNA2D1P54289 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CACNA2D1P54289 GPAA1P2-202ENST00000606848 1787 ntBASIC17.45■□□□□ 0.38
CACNA2D1P54289 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA2D1P54289 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.45■□□□□ 0.38
CACNA2D1P54289 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA2D1P54289 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.45■□□□□ 0.38
CACNA2D1P54289 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA2D1P54289 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA2D1P54289 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CACNA2D1P54289 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA2D1P54289 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.45■□□□□ 0.38
CACNA2D1P54289 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA2D1P54289 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA2D1P54289 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA2D1P54289 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA2D1P54289 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA2D1P54289 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CACNA2D1P54289 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CACNA2D1P54289 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA2D1P54289 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA2D1P54289 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA2D1P54289 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA2D1P54289 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA2D1P54289 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CACNA2D1P54289 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CACNA2D1P54289 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA2D1P54289 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CACNA2D1P54289 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CACNA2D1P54289 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.45■□□□□ 0.38
CACNA2D1P54289 RBPMS2P1-201ENST00000437762 623 ntBASIC17.45■□□□□ 0.38
CACNA2D1P54289 SPDYE14P-201ENST00000442619 822 ntBASIC17.45■□□□□ 0.38
CACNA2D1P54289 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.45■□□□□ 0.38
CACNA2D1P54289 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA2D1P54289 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.45■□□□□ 0.38
CACNA2D1P54289 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.45■□□□□ 0.38
CACNA2D1P54289 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.45■□□□□ 0.38
CACNA2D1P54289 AC106028.4-201ENST00000614509 607 ntBASIC17.45■□□□□ 0.38
CACNA2D1P54289 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.45■□□□□ 0.38
CACNA2D1P54289 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.45■□□□□ 0.38
CACNA2D1P54289 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA2D1P54289 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.45■□□□□ 0.38
CACNA2D1P54289 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.45■□□□□ 0.38
CACNA2D1P54289 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CACNA2D1P54289 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA2D1P54289 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.45■□□□□ 0.38
CACNA2D1P54289 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA2D1P54289 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA2D1P54289 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.44■□□□□ 0.38
CACNA2D1P54289 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA2D1P54289 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CACNA2D1P54289 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA2D1P54289 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA2D1P54289 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA2D1P54289 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CACNA2D1P54289 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA2D1P54289 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA2D1P54289 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.44■□□□□ 0.38
CACNA2D1P54289 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.44■□□□□ 0.38
CACNA2D1P54289 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.44■□□□□ 0.38
CACNA2D1P54289 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
CACNA2D1P54289 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA2D1P54289 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA2D1P54289 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.44■□□□□ 0.38
CACNA2D1P54289 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.44■□□□□ 0.38
CACNA2D1P54289 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
CACNA2D1P54289 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
CACNA2D1P54289 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms