Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF144AP50876 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF144AP50876 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.37■□□□□ 0.05
RNF144AP50876 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.37■□□□□ 0.05
RNF144AP50876 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RNF144AP50876 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF144AP50876 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF144AP50876 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF144AP50876 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF144AP50876 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.37■□□□□ 0.05
RNF144AP50876 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.37■□□□□ 0.05
RNF144AP50876 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.37■□□□□ 0.05
RNF144AP50876 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF144AP50876 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF144AP50876 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF144AP50876 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF144AP50876 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
RNF144AP50876 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RNF144AP50876 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF144AP50876 FAM185BP-201ENST00000443595 716 ntBASIC15.37■□□□□ 0.05
RNF144AP50876 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RNF144AP50876 KRT18P2-201ENST00000447938 1258 ntBASIC15.37■□□□□ 0.05
RNF144AP50876 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC15.37■□□□□ 0.05
RNF144AP50876 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.37■□□□□ 0.05
RNF144AP50876 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.37■□□□□ 0.05
RNF144AP50876 AC087641.1-201ENST00000557561 1021 ntBASIC15.37■□□□□ 0.05
RNF144AP50876 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.37■□□□□ 0.05
RNF144AP50876 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.37■□□□□ 0.05
RNF144AP50876 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
RNF144AP50876 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF144AP50876 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.37■□□□□ 0.05
RNF144AP50876 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RNF144AP50876 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF144AP50876 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF144AP50876 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
RNF144AP50876 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF144AP50876 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.37■□□□□ 0.05
RNF144AP50876 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF144AP50876 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF144AP50876 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF144AP50876 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF144AP50876 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF144AP50876 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF144AP50876 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF144AP50876 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.36■□□□□ 0.05
RNF144AP50876 PAUPAR-201ENST00000630360 2965 ntBASIC15.36■□□□□ 0.05
RNF144AP50876 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF144AP50876 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF144AP50876 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF144AP50876 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF144AP50876 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF144AP50876 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
RNF144AP50876 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF144AP50876 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
RNF144AP50876 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF144AP50876 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF144AP50876 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.36■□□□□ 0.05
RNF144AP50876 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF144AP50876 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF144AP50876 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF144AP50876 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF144AP50876 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF144AP50876 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF144AP50876 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF144AP50876 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RNF144AP50876 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.36■□□□□ 0.05
RNF144AP50876 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF144AP50876 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.36■□□□□ 0.05
RNF144AP50876 HCG4B-203ENST00000450128 991 ntBASIC15.36■□□□□ 0.05
RNF144AP50876 AC098799.1-201ENST00000504752 800 ntBASIC15.36■□□□□ 0.05
RNF144AP50876 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF144AP50876 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.36■□□□□ 0.05
RNF144AP50876 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.36■□□□□ 0.05
RNF144AP50876 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.36■□□□□ 0.05
RNF144AP50876 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF144AP50876 AC005412.3-201ENST00000580309 715 ntBASIC15.36■□□□□ 0.05
RNF144AP50876 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF144AP50876 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
RNF144AP50876 AC064836.3-201ENST00000607928 673 ntBASIC15.36■□□□□ 0.05
RNF144AP50876 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RNF144AP50876 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF144AP50876 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF144AP50876 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF144AP50876 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.36■□□□□ 0.05
RNF144AP50876 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF144AP50876 AC012569.1-201ENST00000591191 1524 ntBASIC15.36■□□□□ 0.05
RNF144AP50876 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF144AP50876 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RNF144AP50876 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF144AP50876 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RNF144AP50876 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
RNF144AP50876 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF144AP50876 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.36■□□□□ 0.05
RNF144AP50876 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF144AP50876 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF144AP50876 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF144AP50876 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
RNF144AP50876 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF144AP50876 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RNF144AP50876 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms