Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC8P31273 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.73■□□□□ 0.43
HOXC8P31273 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.73■□□□□ 0.43
HOXC8P31273 KRT17P8-201ENST00000540749 863 ntBASIC17.73■□□□□ 0.43
HOXC8P31273 TIMM17BP1-201ENST00000545713 516 ntBASIC17.73■□□□□ 0.43
HOXC8P31273 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC8P31273 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.73■□□□□ 0.43
HOXC8P31273 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.73■□□□□ 0.43
HOXC8P31273 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.73■□□□□ 0.43
HOXC8P31273 LINC01115-203ENST00000606068 577 ntBASIC17.73■□□□□ 0.43
HOXC8P31273 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
HOXC8P31273 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.73■□□□□ 0.43
HOXC8P31273 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC8P31273 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC8P31273 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC8P31273 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC8P31273 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC8P31273 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC8P31273 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC8P31273 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
HOXC8P31273 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.72■□□□□ 0.43
HOXC8P31273 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC8P31273 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXC8P31273 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC8P31273 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC8P31273 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC8P31273 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC8P31273 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.72■□□□□ 0.43
HOXC8P31273 TMEM14DP-201ENST00000422205 345 ntBASIC17.72■□□□□ 0.43
HOXC8P31273 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.72■□□□□ 0.43
HOXC8P31273 TTTY23B-201ENST00000442790 549 ntBASIC17.72■□□□□ 0.43
HOXC8P31273 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC8P31273 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.72■□□□□ 0.43
HOXC8P31273 AC092552.1-201ENST00000547243 906 ntBASIC17.72■□□□□ 0.43
HOXC8P31273 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.72■□□□□ 0.43
HOXC8P31273 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
HOXC8P31273 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC8P31273 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC8P31273 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC8P31273 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC8P31273 CDC14C-201ENST00000428251 1719 ntBASIC17.72■□□□□ 0.43
HOXC8P31273 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.72■□□□□ 0.43
HOXC8P31273 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXC8P31273 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.72■□□□□ 0.43
HOXC8P31273 KRT8P37-201ENST00000451609 1420 ntBASIC17.72■□□□□ 0.43
HOXC8P31273 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HOXC8P31273 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
HOXC8P31273 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXC8P31273 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.71■□□□□ 0.43
HOXC8P31273 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.71■□□□□ 0.43
HOXC8P31273 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
HOXC8P31273 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC8P31273 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.71■□□□□ 0.43
HOXC8P31273 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC8P31273 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
HOXC8P31273 MIR1909-201ENST00000411312 80 ntBASIC17.71■□□□□ 0.43
HOXC8P31273 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC8P31273 HLA-V-201ENST00000429037 534 ntBASIC17.71■□□□□ 0.43
HOXC8P31273 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.71■□□□□ 0.43
HOXC8P31273 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.71■□□□□ 0.43
HOXC8P31273 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.71■□□□□ 0.43
HOXC8P31273 AC243562.2-201ENST00000561247 970 ntBASIC17.71■□□□□ 0.43
HOXC8P31273 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.71■□□□□ 0.43
HOXC8P31273 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.71■□□□□ 0.43
HOXC8P31273 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.71■□□□□ 0.43
HOXC8P31273 AC017083.2-201ENST00000608069 979 ntBASIC17.71■□□□□ 0.43
HOXC8P31273 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.71■□□□□ 0.43
HOXC8P31273 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.71■□□□□ 0.43
HOXC8P31273 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC8P31273 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
HOXC8P31273 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC8P31273 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
HOXC8P31273 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.71■□□□□ 0.43
HOXC8P31273 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC8P31273 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC8P31273 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HOXC8P31273 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.71■□□□□ 0.43
HOXC8P31273 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.71■□□□□ 0.43
HOXC8P31273 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.71■□□□□ 0.43
HOXC8P31273 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.71■□□□□ 0.43
HOXC8P31273 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.71■□□□□ 0.43
HOXC8P31273 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
HOXC8P31273 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
HOXC8P31273 PCDHB18P-201ENST00000524813 2368 ntBASIC17.71■□□□□ 0.42
HOXC8P31273 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
HOXC8P31273 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC8P31273 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC8P31273 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HOXC8P31273 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC8P31273 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.7■□□□□ 0.42
HOXC8P31273 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.7■□□□□ 0.42
HOXC8P31273 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC8P31273 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HOXC8P31273 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC8P31273 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC8P31273 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC8P31273 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HOXC8P31273 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HOXC8P31273 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HOXC8P31273 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms