Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 LINC02447-202ENST00000501888 2146 ntBASIC19.81■□□□□ 0.76
CHMLP26374 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMLP26374 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.81■□□□□ 0.76
CHMLP26374 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.81■□□□□ 0.76
CHMLP26374 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.81■□□□□ 0.76
CHMLP26374 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CHMLP26374 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMLP26374 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMLP26374 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMLP26374 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.81■□□□□ 0.76
CHMLP26374 AC002056.1-201ENST00000395613 760 ntBASIC19.81■□□□□ 0.76
CHMLP26374 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.81■□□□□ 0.76
CHMLP26374 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.81■□□□□ 0.76
CHMLP26374 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.81■□□□□ 0.76
CHMLP26374 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHMLP26374 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.81■□□□□ 0.76
CHMLP26374 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.81■□□□□ 0.76
CHMLP26374 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHMLP26374 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.81■□□□□ 0.76
CHMLP26374 AL161645.1-201ENST00000622716 1255 ntBASIC19.81■□□□□ 0.76
CHMLP26374 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.81■□□□□ 0.76
CHMLP26374 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHMLP26374 AC069224.1-201ENST00000566372 1715 ntBASIC19.81■□□□□ 0.76
CHMLP26374 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.81■□□□□ 0.76
CHMLP26374 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHMLP26374 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMLP26374 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMLP26374 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.81■□□□□ 0.76
CHMLP26374 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.81■□□□□ 0.76
CHMLP26374 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMLP26374 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMLP26374 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMLP26374 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.8■□□□□ 0.76
CHMLP26374 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.8■□□□□ 0.76
CHMLP26374 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMLP26374 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMLP26374 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMLP26374 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMLP26374 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMLP26374 AC046158.3-201ENST00000624947 2558 ntBASIC19.8■□□□□ 0.76
CHMLP26374 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMLP26374 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMLP26374 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMLP26374 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMLP26374 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMLP26374 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMLP26374 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMLP26374 MIR648-201ENST00000385046 94 ntBASIC19.8■□□□□ 0.76
CHMLP26374 MIR574-201ENST00000385209 96 ntBASIC19.8■□□□□ 0.76
CHMLP26374 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CHMLP26374 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMLP26374 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CHMLP26374 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CHMLP26374 PGAM5P1-201ENST00000518923 814 ntBASIC19.8■□□□□ 0.76
CHMLP26374 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CHMLP26374 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.8■□□□□ 0.76
CHMLP26374 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.8■□□□□ 0.76
CHMLP26374 AL138918.1-201ENST00000568306 659 ntBASIC19.8■□□□□ 0.76
CHMLP26374 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMLP26374 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMLP26374 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMLP26374 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMLP26374 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.8■□□□□ 0.76
CHMLP26374 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMLP26374 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMLP26374 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CHMLP26374 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMLP26374 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMLP26374 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMLP26374 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CHMLP26374 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMLP26374 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMLP26374 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.79■□□□□ 0.76
CHMLP26374 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHMLP26374 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMLP26374 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CHMLP26374 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMLP26374 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMLP26374 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CHMLP26374 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMLP26374 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHMLP26374 PAUPAR-201ENST00000630360 2965 ntBASIC19.79■□□□□ 0.76
CHMLP26374 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CHMLP26374 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMLP26374 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMLP26374 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMLP26374 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMLP26374 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHMLP26374 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CHMLP26374 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.79■□□□□ 0.76
CHMLP26374 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.79■□□□□ 0.76
CHMLP26374 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHMLP26374 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.79■□□□□ 0.76
CHMLP26374 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.79■□□□□ 0.76
CHMLP26374 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.79■□□□□ 0.76
CHMLP26374 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.79■□□□□ 0.76
CHMLP26374 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.79■□□□□ 0.76
CHMLP26374 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CHMLP26374 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHMLP26374 AL589702.1-201ENST00000641229 1509 ntBASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms