Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 AC092053.1-201ENST00000605787 1936 ntBASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 AC098859.1-201ENST00000502915 1238 ntBASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 RN7SL204P-201ENST00000582831 262 ntBASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 FOXO1B-201ENST00000504678 1527 ntBASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 AC073439.1-201ENST00000624121 1774 ntBASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 AC018695.7-201ENST00000624587 2492 ntBASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 AC236430.1-201ENST00000402231 743 ntBASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 AL353705.2-201ENST00000428243 662 ntBASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 AC027369.6-201ENST00000525520 931 ntBASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RAB40ALP0C0E4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 UGT1A2P-201ENST00000454886 866 ntBASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 HLA-V-204ENST00000476601 1289 ntBASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.49■□□□□ 0.07
RAB40ALP0C0E4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms