Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.94□□□□□ -0.02
FREM3P0C091 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
FREM3P0C091 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
FREM3P0C091 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FREM3P0C091 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
FREM3P0C091 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
FREM3P0C091 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.94□□□□□ -0.02
FREM3P0C091 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FREM3P0C091 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
FREM3P0C091 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.93□□□□□ -0.02
FREM3P0C091 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
FREM3P0C091 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.93□□□□□ -0.02
FREM3P0C091 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.93□□□□□ -0.02
FREM3P0C091 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.93□□□□□ -0.02
FREM3P0C091 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
FREM3P0C091 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
FREM3P0C091 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
FREM3P0C091 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
FREM3P0C091 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
FREM3P0C091 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
FREM3P0C091 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
FREM3P0C091 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
FREM3P0C091 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.93□□□□□ -0.02
FREM3P0C091 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
FREM3P0C091 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
FREM3P0C091 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
FREM3P0C091 KRT18P28-201ENST00000453838 1332 ntBASIC14.93□□□□□ -0.02
FREM3P0C091 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
FREM3P0C091 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
FREM3P0C091 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.93□□□□□ -0.02
FREM3P0C091 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
FREM3P0C091 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.93□□□□□ -0.02
FREM3P0C091 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
FREM3P0C091 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.93□□□□□ -0.02
FREM3P0C091 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
FREM3P0C091 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
FREM3P0C091 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.93□□□□□ -0.02
FREM3P0C091 RBPMS2P1-201ENST00000437762 623 ntBASIC14.93□□□□□ -0.02
FREM3P0C091 AP002490.2-201ENST00000524791 560 ntBASIC14.93□□□□□ -0.02
FREM3P0C091 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.93□□□□□ -0.02
FREM3P0C091 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
FREM3P0C091 AC011467.4-201ENST00000594891 528 ntBASIC14.93□□□□□ -0.02
FREM3P0C091 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
FREM3P0C091 AC106028.4-201ENST00000614509 607 ntBASIC14.93□□□□□ -0.02
FREM3P0C091 AL590560.3-201ENST00000623350 461 ntBASIC14.93□□□□□ -0.02
FREM3P0C091 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
FREM3P0C091 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
FREM3P0C091 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
FREM3P0C091 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
FREM3P0C091 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
FREM3P0C091 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
FREM3P0C091 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
FREM3P0C091 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
FREM3P0C091 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
FREM3P0C091 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.92□□□□□ -0.02
FREM3P0C091 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.92□□□□□ -0.02
FREM3P0C091 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
FREM3P0C091 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.92□□□□□ -0.02
FREM3P0C091 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
FREM3P0C091 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FREM3P0C091 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.92□□□□□ -0.02
FREM3P0C091 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FREM3P0C091 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.92□□□□□ -0.02
FREM3P0C091 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FREM3P0C091 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.92□□□□□ -0.02
FREM3P0C091 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FREM3P0C091 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.92□□□□□ -0.02
FREM3P0C091 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.92□□□□□ -0.02
FREM3P0C091 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.92□□□□□ -0.02
FREM3P0C091 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.92□□□□□ -0.02
FREM3P0C091 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.92□□□□□ -0.02
FREM3P0C091 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FREM3P0C091 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.92□□□□□ -0.02
FREM3P0C091 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
FREM3P0C091 DOC2GP-204ENST00000639052 2548 ntBASIC14.92□□□□□ -0.02
FREM3P0C091 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FREM3P0C091 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.92□□□□□ -0.02
FREM3P0C091 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FREM3P0C091 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
FREM3P0C091 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.92□□□□□ -0.02
FREM3P0C091 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.92□□□□□ -0.02
FREM3P0C091 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.92□□□□□ -0.02
FREM3P0C091 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.92□□□□□ -0.02
FREM3P0C091 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.92□□□□□ -0.02
FREM3P0C091 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
FREM3P0C091 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
FREM3P0C091 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FREM3P0C091 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
FREM3P0C091 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FREM3P0C091 GPAA1P2-202ENST00000606848 1787 ntBASIC14.92□□□□□ -0.02
FREM3P0C091 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.92□□□□□ -0.02
FREM3P0C091 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FREM3P0C091 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
FREM3P0C091 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.92□□□□□ -0.02
FREM3P0C091 AC107890.1-201ENST00000422478 521 ntBASIC14.92□□□□□ -0.02
FREM3P0C091 SPDYE14P-201ENST00000442619 822 ntBASIC14.92□□□□□ -0.02
FREM3P0C091 RN7SL589P-201ENST00000481268 310 ntBASIC14.92□□□□□ -0.02
FREM3P0C091 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.92□□□□□ -0.02
FREM3P0C091 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.92□□□□□ -0.02
FREM3P0C091 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms