Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
GGPS1O95749 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.43■□□□□ 0.54
GGPS1O95749 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GGPS1O95749 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GGPS1O95749 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GGPS1O95749 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GGPS1O95749 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GGPS1O95749 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GGPS1O95749 CETN4P-206ENST00000642099 2168 ntBASIC18.42■□□□□ 0.54
GGPS1O95749 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GGPS1O95749 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GGPS1O95749 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GGPS1O95749 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
GGPS1O95749 AC105020.1-201ENST00000435356 2205 ntBASIC18.42■□□□□ 0.54
GGPS1O95749 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GGPS1O95749 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
GGPS1O95749 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
GGPS1O95749 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
GGPS1O95749 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
GGPS1O95749 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.42■□□□□ 0.54
GGPS1O95749 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
GGPS1O95749 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GGPS1O95749 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GGPS1O95749 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GGPS1O95749 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.42■□□□□ 0.54
GGPS1O95749 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
GGPS1O95749 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.42■□□□□ 0.54
GGPS1O95749 SERBP1P5-201ENST00000510079 1181 ntBASIC18.42■□□□□ 0.54
GGPS1O95749 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
GGPS1O95749 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
GGPS1O95749 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.42■□□□□ 0.54
GGPS1O95749 AL589702.1-201ENST00000641229 1509 ntBASIC18.42■□□□□ 0.54
GGPS1O95749 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GGPS1O95749 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GGPS1O95749 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
GGPS1O95749 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
GGPS1O95749 AC022144.1-201ENST00000602255 1580 ntBASIC18.42■□□□□ 0.54
GGPS1O95749 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GGPS1O95749 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GGPS1O95749 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.42■□□□□ 0.54
GGPS1O95749 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.42■□□□□ 0.54
GGPS1O95749 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GGPS1O95749 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
GGPS1O95749 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.41■□□□□ 0.54
GGPS1O95749 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
GGPS1O95749 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
GGPS1O95749 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GGPS1O95749 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GGPS1O95749 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GGPS1O95749 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GGPS1O95749 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GGPS1O95749 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
GGPS1O95749 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GGPS1O95749 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GGPS1O95749 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GGPS1O95749 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GGPS1O95749 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.41■□□□□ 0.54
GGPS1O95749 RPL37AP1-201ENST00000412502 279 ntBASIC18.41■□□□□ 0.54
GGPS1O95749 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.41■□□□□ 0.54
GGPS1O95749 AC015922.1-201ENST00000421102 1152 ntBASIC18.41■□□□□ 0.54
GGPS1O95749 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.41■□□□□ 0.54
GGPS1O95749 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.41■□□□□ 0.54
GGPS1O95749 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
GGPS1O95749 HLA-J-202ENST00000469281 1241 ntBASIC18.41■□□□□ 0.54
GGPS1O95749 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.41■□□□□ 0.54
GGPS1O95749 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.41■□□□□ 0.54
GGPS1O95749 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.41■□□□□ 0.54
GGPS1O95749 TEX28P1-201ENST00000613479 1221 ntBASIC18.41■□□□□ 0.54
GGPS1O95749 TEX28P2-201ENST00000617764 1221 ntBASIC18.41■□□□□ 0.54
GGPS1O95749 AL118508.1-201ENST00000613502 2345 ntBASIC18.41■□□□□ 0.54
GGPS1O95749 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GGPS1O95749 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
GGPS1O95749 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
GGPS1O95749 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.41■□□□□ 0.54
GGPS1O95749 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.41■□□□□ 0.54
GGPS1O95749 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
GGPS1O95749 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
GGPS1O95749 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GGPS1O95749 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
GGPS1O95749 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GGPS1O95749 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.4■□□□□ 0.54
GGPS1O95749 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.4■□□□□ 0.54
GGPS1O95749 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
GGPS1O95749 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
GGPS1O95749 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GGPS1O95749 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GGPS1O95749 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
GGPS1O95749 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GGPS1O95749 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GGPS1O95749 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
GGPS1O95749 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GGPS1O95749 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GGPS1O95749 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.4■□□□□ 0.54
GGPS1O95749 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.4■□□□□ 0.54
GGPS1O95749 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GGPS1O95749 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GGPS1O95749 AL133215.2-201ENST00000609242 977 ntBASIC18.4■□□□□ 0.54
GGPS1O95749 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.4■□□□□ 0.54
GGPS1O95749 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.4■□□□□ 0.54
GGPS1O95749 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms