Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL5O76039 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.16■□□□□ 0.66
CDKL5O76039 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CDKL5O76039 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CDKL5O76039 WASH6P-202ENST00000359512 1437 ntBASIC19.16■□□□□ 0.66
CDKL5O76039 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL5O76039 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKL5O76039 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDKL5O76039 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.15■□□□□ 0.66
CDKL5O76039 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CDKL5O76039 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDKL5O76039 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKL5O76039 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKL5O76039 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKL5O76039 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.15■□□□□ 0.66
CDKL5O76039 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.15■□□□□ 0.66
CDKL5O76039 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.15■□□□□ 0.66
CDKL5O76039 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.15■□□□□ 0.66
CDKL5O76039 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CDKL5O76039 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.15■□□□□ 0.66
CDKL5O76039 AP002472.1-201ENST00000577490 586 ntBASIC19.15■□□□□ 0.66
CDKL5O76039 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.15■□□□□ 0.66
CDKL5O76039 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CDKL5O76039 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.15■□□□□ 0.66
CDKL5O76039 AC092865.6-201ENST00000642101 219 ntBASIC19.15■□□□□ 0.66
CDKL5O76039 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CDKL5O76039 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.15■□□□□ 0.66
CDKL5O76039 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKL5O76039 AL592424.1-201ENST00000563624 1536 ntBASIC19.15■□□□□ 0.66
CDKL5O76039 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CDKL5O76039 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.66
CDKL5O76039 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDKL5O76039 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDKL5O76039 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDKL5O76039 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.14■□□□□ 0.65
CDKL5O76039 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.14■□□□□ 0.65
CDKL5O76039 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CDKL5O76039 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDKL5O76039 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.14■□□□□ 0.65
CDKL5O76039 KRT18P58-201ENST00000527480 1120 ntBASIC19.14■□□□□ 0.65
CDKL5O76039 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.14■□□□□ 0.65
CDKL5O76039 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.14■□□□□ 0.65
CDKL5O76039 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CDKL5O76039 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDKL5O76039 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.14■□□□□ 0.65
CDKL5O76039 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
CDKL5O76039 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDKL5O76039 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.14■□□□□ 0.65
CDKL5O76039 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CDKL5O76039 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
CDKL5O76039 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDKL5O76039 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDKL5O76039 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.14■□□□□ 0.65
CDKL5O76039 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDKL5O76039 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDKL5O76039 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDKL5O76039 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.14■□□□□ 0.65
CDKL5O76039 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.14■□□□□ 0.65
CDKL5O76039 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDKL5O76039 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDKL5O76039 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDKL5O76039 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CDKL5O76039 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.13■□□□□ 0.65
CDKL5O76039 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDKL5O76039 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDKL5O76039 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDKL5O76039 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.13■□□□□ 0.65
CDKL5O76039 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDKL5O76039 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDKL5O76039 AL022342.1-201ENST00000400363 863 ntBASIC19.13■□□□□ 0.65
CDKL5O76039 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CDKL5O76039 AC093724.1-201ENST00000448659 1027 ntBASIC19.13■□□□□ 0.65
CDKL5O76039 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.13■□□□□ 0.65
CDKL5O76039 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CDKL5O76039 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.13■□□□□ 0.65
CDKL5O76039 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.13■□□□□ 0.65
CDKL5O76039 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.13■□□□□ 0.65
CDKL5O76039 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.13■□□□□ 0.65
CDKL5O76039 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.13■□□□□ 0.65
CDKL5O76039 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDKL5O76039 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDKL5O76039 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC19.13■□□□□ 0.65
CDKL5O76039 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDKL5O76039 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.13■□□□□ 0.65
CDKL5O76039 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.13■□□□□ 0.65
CDKL5O76039 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.13■□□□□ 0.65
CDKL5O76039 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDKL5O76039 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.13■□□□□ 0.65
CDKL5O76039 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDKL5O76039 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
CDKL5O76039 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDKL5O76039 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDKL5O76039 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDKL5O76039 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDKL5O76039 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDKL5O76039 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDKL5O76039 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDKL5O76039 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDKL5O76039 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CDKL5O76039 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms