Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
KDELR3O43731 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.65■□□□□ 0.26
KDELR3O43731 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.65■□□□□ 0.26
KDELR3O43731 RNA5SP410-201ENST00000516285 106 ntBASIC16.65■□□□□ 0.26
KDELR3O43731 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
KDELR3O43731 AC025678.2-201ENST00000562061 970 ntBASIC16.65■□□□□ 0.26
KDELR3O43731 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KDELR3O43731 AL365330.1-201ENST00000607459 531 ntBASIC16.65■□□□□ 0.26
KDELR3O43731 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.65■□□□□ 0.26
KDELR3O43731 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KDELR3O43731 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
KDELR3O43731 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KDELR3O43731 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KDELR3O43731 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KDELR3O43731 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
KDELR3O43731 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.65■□□□□ 0.26
KDELR3O43731 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KDELR3O43731 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.65■□□□□ 0.26
KDELR3O43731 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
KDELR3O43731 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.64■□□□□ 0.26
KDELR3O43731 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
KDELR3O43731 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.64■□□□□ 0.25
KDELR3O43731 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
KDELR3O43731 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.64■□□□□ 0.25
KDELR3O43731 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
KDELR3O43731 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KDELR3O43731 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.64■□□□□ 0.25
KDELR3O43731 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
KDELR3O43731 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KDELR3O43731 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KDELR3O43731 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KDELR3O43731 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
KDELR3O43731 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.64■□□□□ 0.25
KDELR3O43731 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.64■□□□□ 0.25
KDELR3O43731 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.64■□□□□ 0.25
KDELR3O43731 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.64■□□□□ 0.25
KDELR3O43731 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.64■□□□□ 0.25
KDELR3O43731 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.64■□□□□ 0.25
KDELR3O43731 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.64■□□□□ 0.25
KDELR3O43731 AC069262.1-201ENST00000539058 672 ntBASIC16.64■□□□□ 0.25
KDELR3O43731 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.64■□□□□ 0.25
KDELR3O43731 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.64■□□□□ 0.25
KDELR3O43731 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KDELR3O43731 AC061975.2-201ENST00000581722 295 ntBASIC16.64■□□□□ 0.25
KDELR3O43731 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KDELR3O43731 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.64■□□□□ 0.25
KDELR3O43731 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KDELR3O43731 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.64■□□□□ 0.25
KDELR3O43731 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.64■□□□□ 0.25
KDELR3O43731 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KDELR3O43731 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.64■□□□□ 0.25
KDELR3O43731 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KDELR3O43731 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KDELR3O43731 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KDELR3O43731 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KDELR3O43731 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
KDELR3O43731 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
KDELR3O43731 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KDELR3O43731 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
KDELR3O43731 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.64■□□□□ 0.25
KDELR3O43731 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.64■□□□□ 0.25
KDELR3O43731 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.64■□□□□ 0.25
KDELR3O43731 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
KDELR3O43731 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
KDELR3O43731 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KDELR3O43731 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
KDELR3O43731 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KDELR3O43731 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
KDELR3O43731 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.64■□□□□ 0.25
KDELR3O43731 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.64■□□□□ 0.25
KDELR3O43731 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.63■□□□□ 0.25
KDELR3O43731 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.63■□□□□ 0.25
KDELR3O43731 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KDELR3O43731 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
KDELR3O43731 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KDELR3O43731 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.63■□□□□ 0.25
KDELR3O43731 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.63■□□□□ 0.25
KDELR3O43731 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KDELR3O43731 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KDELR3O43731 SPDYE7P-202ENST00000420373 878 ntBASIC16.63■□□□□ 0.25
KDELR3O43731 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.63■□□□□ 0.25
KDELR3O43731 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.63■□□□□ 0.25
KDELR3O43731 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
KDELR3O43731 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KDELR3O43731 AC018529.1-201ENST00000613063 361 ntBASIC16.63■□□□□ 0.25
KDELR3O43731 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.63■□□□□ 0.25
KDELR3O43731 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
KDELR3O43731 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.63■□□□□ 0.25
KDELR3O43731 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KDELR3O43731 AC093028.1-201ENST00000622998 982 ntBASIC16.63■□□□□ 0.25
KDELR3O43731 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.63■□□□□ 0.25
KDELR3O43731 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
KDELR3O43731 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KDELR3O43731 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.63■□□□□ 0.25
KDELR3O43731 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
KDELR3O43731 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KDELR3O43731 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KDELR3O43731 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
KDELR3O43731 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
KDELR3O43731 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms