Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LDB2O43679 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LDB2O43679 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LDB2O43679 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LDB2O43679 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.45■□□□□ 0.22
LDB2O43679 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.45■□□□□ 0.22
LDB2O43679 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LDB2O43679 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.45■□□□□ 0.22
LDB2O43679 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LDB2O43679 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LDB2O43679 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LDB2O43679 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.44■□□□□ 0.22
LDB2O43679 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.44■□□□□ 0.22
LDB2O43679 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.44■□□□□ 0.22
LDB2O43679 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LDB2O43679 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.44■□□□□ 0.22
LDB2O43679 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LDB2O43679 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LDB2O43679 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
LDB2O43679 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.44■□□□□ 0.22
LDB2O43679 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LDB2O43679 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.44■□□□□ 0.22
LDB2O43679 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.44■□□□□ 0.22
LDB2O43679 AL355306.1-201ENST00000415580 579 ntBASIC16.44■□□□□ 0.22
LDB2O43679 BX842568.4-201ENST00000421222 227 ntBASIC16.44■□□□□ 0.22
LDB2O43679 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.44■□□□□ 0.22
LDB2O43679 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.44■□□□□ 0.22
LDB2O43679 ADH5P3-201ENST00000433842 1137 ntBASIC16.44■□□□□ 0.22
LDB2O43679 FAM58CP-201ENST00000435741 640 ntBASIC16.44■□□□□ 0.22
LDB2O43679 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
LDB2O43679 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LDB2O43679 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LDB2O43679 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.44■□□□□ 0.22
LDB2O43679 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.44■□□□□ 0.22
LDB2O43679 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.44■□□□□ 0.22
LDB2O43679 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.44■□□□□ 0.22
LDB2O43679 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.44■□□□□ 0.22
LDB2O43679 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LDB2O43679 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.44■□□□□ 0.22
LDB2O43679 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
LDB2O43679 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LDB2O43679 AC139530.3-201ENST00000620344 690 ntBASIC16.44■□□□□ 0.22
LDB2O43679 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
LDB2O43679 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.44■□□□□ 0.22
LDB2O43679 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.44■□□□□ 0.22
LDB2O43679 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.44■□□□□ 0.22
LDB2O43679 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LDB2O43679 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.44■□□□□ 0.22
LDB2O43679 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB2O43679 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB2O43679 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB2O43679 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
LDB2O43679 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB2O43679 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB2O43679 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.43■□□□□ 0.22
LDB2O43679 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.43■□□□□ 0.22
LDB2O43679 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LDB2O43679 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.43■□□□□ 0.22
LDB2O43679 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LDB2O43679 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.43■□□□□ 0.22
LDB2O43679 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB2O43679 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.43■□□□□ 0.22
LDB2O43679 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.43■□□□□ 0.22
LDB2O43679 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
LDB2O43679 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB2O43679 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LDB2O43679 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
LDB2O43679 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LDB2O43679 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.43■□□□□ 0.22
LDB2O43679 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB2O43679 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB2O43679 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB2O43679 MIR1233-2-201ENST00000408138 82 ntBASIC16.43■□□□□ 0.22
LDB2O43679 MIR1233-1-201ENST00000408722 82 ntBASIC16.43■□□□□ 0.22
LDB2O43679 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
LDB2O43679 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.43■□□□□ 0.22
LDB2O43679 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.43■□□□□ 0.22
LDB2O43679 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
LDB2O43679 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
LDB2O43679 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LDB2O43679 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB2O43679 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
LDB2O43679 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
LDB2O43679 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LDB2O43679 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB2O43679 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LDB2O43679 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB2O43679 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.43■□□□□ 0.22
LDB2O43679 AKAP8P1-201ENST00000434743 1349 ntBASIC16.43■□□□□ 0.22
LDB2O43679 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB2O43679 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.43■□□□□ 0.22
LDB2O43679 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB2O43679 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
LDB2O43679 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
LDB2O43679 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB2O43679 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB2O43679 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LDB2O43679 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.42■□□□□ 0.22
LDB2O43679 LINC02199-201ENST00000506655 2702 ntBASIC16.42■□□□□ 0.22
LDB2O43679 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms