Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
MSH5O43196 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
MSH5O43196 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
MSH5O43196 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
MSH5O43196 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
MSH5O43196 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC22.9■■□□□ 1.26
MSH5O43196 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
MSH5O43196 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
MSH5O43196 NFYC-AS1-201ENST00000606277 1687 ntBASIC22.9■■□□□ 1.26
MSH5O43196 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
MSH5O43196 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
MSH5O43196 PCDHA14-201ENST00000506751 2298 ntBASIC22.89■■□□□ 1.26
MSH5O43196 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
MSH5O43196 AL807752.1-201ENST00000395082 1322 ntBASIC22.89■■□□□ 1.26
MSH5O43196 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC22.89■■□□□ 1.26
MSH5O43196 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC22.89■■□□□ 1.26
MSH5O43196 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
MSH5O43196 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
MSH5O43196 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
MSH5O43196 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
MSH5O43196 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
MSH5O43196 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
MSH5O43196 THUMPD1P1-201ENST00000400014 1041 ntBASIC22.89■■□□□ 1.25
MSH5O43196 RPL31-204ENST00000409038 817 ntTSL 2 BASIC22.89■■□□□ 1.25
MSH5O43196 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC22.89■■□□□ 1.25
MSH5O43196 PPP2R2DP1-201ENST00000420526 637 ntBASIC22.89■■□□□ 1.25
MSH5O43196 AC009506.2-201ENST00000420635 840 ntBASIC22.89■■□□□ 1.25
MSH5O43196 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC22.89■■□□□ 1.25
MSH5O43196 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC22.89■■□□□ 1.25
MSH5O43196 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC22.89■■□□□ 1.25
MSH5O43196 ANKRD20A11P-205ENST00000442192 920 ntTSL 3 BASIC22.89■■□□□ 1.25
MSH5O43196 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC22.89■■□□□ 1.25
MSH5O43196 AC091435.1-201ENST00000505442 584 ntBASIC22.89■■□□□ 1.25
MSH5O43196 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC22.89■■□□□ 1.25
MSH5O43196 YBX1P5-201ENST00000509441 847 ntBASIC22.89■■□□□ 1.25
MSH5O43196 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC22.89■■□□□ 1.25
MSH5O43196 AC027807.1-201ENST00000559921 996 ntBASIC22.89■■□□□ 1.25
MSH5O43196 COX5A-202ENST00000562233 441 ntTSL 3 BASIC22.89■■□□□ 1.25
MSH5O43196 AL137802.2-201ENST00000562878 1110 ntBASIC22.89■■□□□ 1.25
MSH5O43196 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
MSH5O43196 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC22.89■■□□□ 1.25
MSH5O43196 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC22.89■■□□□ 1.25
MSH5O43196 AC090425.2-201ENST00000608818 501 ntBASIC22.89■■□□□ 1.25
MSH5O43196 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
MSH5O43196 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
MSH5O43196 MYB-242ENST00000618728 3545 ntTSL 5 BASIC22.89■■□□□ 1.25
MSH5O43196 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
MSH5O43196 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC22.89■■□□□ 1.25
MSH5O43196 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
MSH5O43196 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC22.89■■□□□ 1.25
MSH5O43196 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC22.89■■□□□ 1.25
MSH5O43196 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
MSH5O43196 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
MSH5O43196 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
MSH5O43196 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
MSH5O43196 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
MSH5O43196 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
MSH5O43196 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
MSH5O43196 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC22.88■■□□□ 1.25
MSH5O43196 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
MSH5O43196 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
MSH5O43196 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
MSH5O43196 RNU6-648P-201ENST00000410190 107 ntBASIC22.88■■□□□ 1.25
MSH5O43196 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC22.88■■□□□ 1.25
MSH5O43196 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC22.88■■□□□ 1.25
MSH5O43196 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC22.88■■□□□ 1.25
MSH5O43196 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC22.88■■□□□ 1.25
MSH5O43196 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC22.88■■□□□ 1.25
MSH5O43196 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC22.88■■□□□ 1.25
MSH5O43196 SDHD-202ENST00000525291 790 ntTSL 3 BASIC22.88■■□□□ 1.25
MSH5O43196 AC012038.1-201ENST00000551279 552 ntTSL 4 BASIC22.88■■□□□ 1.25
MSH5O43196 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
MSH5O43196 AC023968.2-201ENST00000560593 1049 ntBASIC22.88■■□□□ 1.25
MSH5O43196 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC22.88■■□□□ 1.25
MSH5O43196 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
MSH5O43196 AC090772.4-201ENST00000623599 362 ntBASIC22.88■■□□□ 1.25
MSH5O43196 AC092865.6-201ENST00000642101 219 ntBASIC22.88■■□□□ 1.25
MSH5O43196 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
MSH5O43196 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
MSH5O43196 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC22.88■■□□□ 1.25
MSH5O43196 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
MSH5O43196 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
MSH5O43196 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
MSH5O43196 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
MSH5O43196 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
MSH5O43196 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
MSH5O43196 MTMR9LP-203ENST00000426597 1545 ntBASIC22.87■■□□□ 1.25
MSH5O43196 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MSH5O43196 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
MSH5O43196 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MSH5O43196 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MSH5O43196 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
MSH5O43196 AC106872.6-201ENST00000514228 1346 ntBASIC22.87■■□□□ 1.25
MSH5O43196 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MSH5O43196 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
MSH5O43196 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
MSH5O43196 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC22.87■■□□□ 1.25
MSH5O43196 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
MSH5O43196 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
MSH5O43196 AL023806.1-201ENST00000603994 1649 ntBASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms