Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM49D1C9J1S8 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM49D1C9J1S8 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM49D1C9J1S8 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM49D1C9J1S8 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM49D1C9J1S8 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM49D1C9J1S8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM49D1C9J1S8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM49D1C9J1S8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM49D1C9J1S8 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM49D1C9J1S8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM49D1C9J1S8 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM49D1C9J1S8 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 AC087641.1-201ENST00000557561 1021 ntBASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 AL355877.3-201ENST00000622820 899 ntBASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 AC006504.4-201ENST00000592118 1568 ntBASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM49D1C9J1S8 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 AC073347.1-201ENST00000421633 2643 ntBASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 AC069224.1-201ENST00000566372 1715 ntBASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 ELK2BP-201ENST00000415014 1224 ntBASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 AL805961.1-202ENST00000641562 540 ntBASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM49D1C9J1S8 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM49D1C9J1S8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms