Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.14■□□□□ 0.66
CCDC196A0A1B0GTZ2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC196A0A1B0GTZ2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.66
CCDC196A0A1B0GTZ2 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC196A0A1B0GTZ2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC196A0A1B0GTZ2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.66
CCDC196A0A1B0GTZ2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.14■□□□□ 0.66
CCDC196A0A1B0GTZ2 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 ADH5P3-201ENST00000433842 1137 ntBASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 AC026120.1-201ENST00000611536 926 ntBASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 AC092364.2-201ENST00000596710 2692 ntBASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC196A0A1B0GTZ2 ELL2P1-201ENST00000413990 1906 ntBASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 AL592424.1-201ENST00000563624 1536 ntBASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 REXO1L8P-201ENST00000604378 1897 ntBASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC196A0A1B0GTZ2 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 AC006449.6-201ENST00000612330 2296 ntBASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CCDC196A0A1B0GTZ2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms