Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 FO681548.1-201ENST00000455617 1132 ntBASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CDC42BPBQ9Y5S2 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CDC42BPBQ9Y5S2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
CDC42BPBQ9Y5S2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDC42BPBQ9Y5S2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDC42BPBQ9Y5S2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC24.4■■□□□ 1.5
CDC42BPBQ9Y5S2 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
CDC42BPBQ9Y5S2 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC24.4■■□□□ 1.5
CDC42BPBQ9Y5S2 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
CDC42BPBQ9Y5S2 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC24.4■■□□□ 1.5
CDC42BPBQ9Y5S2 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC24.4■■□□□ 1.5
CDC42BPBQ9Y5S2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC24.4■■□□□ 1.5
CDC42BPBQ9Y5S2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDC42BPBQ9Y5S2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDC42BPBQ9Y5S2 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
CDC42BPBQ9Y5S2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC24.4■■□□□ 1.5
CDC42BPBQ9Y5S2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC24.4■■□□□ 1.5
CDC42BPBQ9Y5S2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
CDC42BPBQ9Y5S2 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CDC42BPBQ9Y5S2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC24.39■■□□□ 1.5
CDC42BPBQ9Y5S2 RERG-209ENST00000546331 1383 ntTSL 2 BASIC24.39■■□□□ 1.5
CDC42BPBQ9Y5S2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
CDC42BPBQ9Y5S2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CDC42BPBQ9Y5S2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC24.39■■□□□ 1.5
CDC42BPBQ9Y5S2 APOC3-202ENST00000375345 604 ntTSL 5 BASIC24.39■■□□□ 1.5
CDC42BPBQ9Y5S2 AC004987.2-201ENST00000395959 1148 ntBASIC24.39■■□□□ 1.5
CDC42BPBQ9Y5S2 FAM21FP-201ENST00000426241 1131 ntBASIC24.39■■□□□ 1.5
CDC42BPBQ9Y5S2 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
CDC42BPBQ9Y5S2 CD74-212ENST00000524315 584 ntTSL 5 BASIC24.39■■□□□ 1.5
CDC42BPBQ9Y5S2 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC24.39■■□□□ 1.5
CDC42BPBQ9Y5S2 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.5
CDC42BPBQ9Y5S2 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC24.39■■□□□ 1.5
CDC42BPBQ9Y5S2 AC005252.2-201ENST00000624630 1141 ntBASIC24.39■■□□□ 1.5
CDC42BPBQ9Y5S2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CDC42BPBQ9Y5S2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.5
CDC42BPBQ9Y5S2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
CDC42BPBQ9Y5S2 AL645608.8-201ENST00000606034 2086 ntBASIC24.39■■□□□ 1.49
CDC42BPBQ9Y5S2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
CDC42BPBQ9Y5S2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
CDC42BPBQ9Y5S2 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC24.39■■□□□ 1.49
CDC42BPBQ9Y5S2 PCDHB18P-201ENST00000524813 2368 ntBASIC24.39■■□□□ 1.49
CDC42BPBQ9Y5S2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
CDC42BPBQ9Y5S2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.49
CDC42BPBQ9Y5S2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CDC42BPBQ9Y5S2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC24.39■■□□□ 1.49
CDC42BPBQ9Y5S2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC24.39■■□□□ 1.49
CDC42BPBQ9Y5S2 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 AC012441.1-201ENST00000446669 685 ntBASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 PTP4A1P2-201ENST00000546033 454 ntBASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 AC244093.1-201ENST00000610837 814 ntBASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 AP000812.2-201ENST00000538934 718 ntBASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 DUX4L45-201ENST00000566406 1057 ntBASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 DERL2-202ENST00000570848 657 ntTSL 5 BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CDC42BPBQ9Y5S2 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CDC42BPBQ9Y5S2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CDC42BPBQ9Y5S2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CDC42BPBQ9Y5S2 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC24.37■■□□□ 1.49
CDC42BPBQ9Y5S2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CDC42BPBQ9Y5S2 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms