Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNRF3Q9ULT6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ZNRF3Q9ULT6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNRF3Q9ULT6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
ZNRF3Q9ULT6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNRF3Q9ULT6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.57■□□□□ 0.72
ZNRF3Q9ULT6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.57■□□□□ 0.72
ZNRF3Q9ULT6 GGT4P-201ENST00000623672 1708 ntBASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 AC099336.1-201ENST00000417053 1171 ntBASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 AL442647.2-201ENST00000429864 857 ntBASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 MIR5189-201ENST00000577370 114 ntBASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 AC133539.2-201ENST00000604757 467 ntBASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 CU634019.7-201ENST00000624153 1185 ntBASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 FP236241.2-201ENST00000624906 1185 ntBASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.56■□□□□ 0.72
ZNRF3Q9ULT6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 RNA5SP412-201ENST00000516234 123 ntBASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 CD74-212ENST00000524315 584 ntTSL 5 BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 AC036164.1-201ENST00000570544 333 ntBASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 MIR4321-201ENST00000592276 80 ntBASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 AL022328.1-201ENST00000610050 478 ntBASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ZNRF3Q9ULT6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 AL355994.2-201ENST00000447882 704 ntBASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 CSF2RBP1-201ENST00000447905 391 ntBASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 LINC01115-203ENST00000606068 577 ntBASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ZNRF3Q9ULT6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms