Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NPC1L1Q9UHC9 FO538757.1-201ENST00000623083 1397 ntBASIC21.94■■□□□ 1.1
NPC1L1Q9UHC9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPC1L1Q9UHC9 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPC1L1Q9UHC9 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NPC1L1Q9UHC9 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC21.94■■□□□ 1.1
NPC1L1Q9UHC9 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPC1L1Q9UHC9 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC21.94■■□□□ 1.1
NPC1L1Q9UHC9 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NPC1L1Q9UHC9 FRMD6-AS1-201ENST00000617151 2229 ntBASIC21.94■■□□□ 1.1
NPC1L1Q9UHC9 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC21.94■■□□□ 1.1
NPC1L1Q9UHC9 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC21.94■■□□□ 1.1
NPC1L1Q9UHC9 HIST3H2BA-201ENST00000436555 524 ntBASIC21.94■■□□□ 1.1
NPC1L1Q9UHC9 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC21.94■■□□□ 1.1
NPC1L1Q9UHC9 AC069120.2-201ENST00000524091 540 ntBASIC21.94■■□□□ 1.1
NPC1L1Q9UHC9 ZNF890P-202ENST00000530367 1156 ntBASIC21.94■■□□□ 1.1
NPC1L1Q9UHC9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPC1L1Q9UHC9 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC21.94■■□□□ 1.1
NPC1L1Q9UHC9 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC21.94■■□□□ 1.1
NPC1L1Q9UHC9 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC21.94■■□□□ 1.1
NPC1L1Q9UHC9 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPC1L1Q9UHC9 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPC1L1Q9UHC9 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 VMA21-202ENST00000370361 693 ntTSL 5 BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 TEX28P1-201ENST00000613479 1221 ntBASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 AL138828.2-201ENST00000615812 383 ntBASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 TEX28P2-201ENST00000617764 1221 ntBASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 AC073592.8-201ENST00000624126 511 ntBASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 AIRN-201ENST00000601203 4374 ntBASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPC1L1Q9UHC9 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 AC099398.1-201ENST00000567919 2776 ntBASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 TSSK5P-201ENST00000423978 907 ntBASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
NPC1L1Q9UHC9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 AC011477.6-201ENST00000604980 1927 ntBASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 RPS19-201ENST00000221975 500 ntTSL 3 BASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 RPL37AP1-201ENST00000412502 279 ntBASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 BLK-205ENST00000529894 2017 ntTSL 5 BASIC21.91■■□□□ 1.1
NPC1L1Q9UHC9 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms