Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC005622.1-201ENST00000636801 1703 ntBASIC18.3■□□□□ 0.52
VTA1Q9NP79 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VTA1Q9NP79 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.3■□□□□ 0.52
VTA1Q9NP79 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
VTA1Q9NP79 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VTA1Q9NP79 MEP1AP4-201ENST00000423244 1087 ntBASIC18.3■□□□□ 0.52
VTA1Q9NP79 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.3■□□□□ 0.52
VTA1Q9NP79 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.3■□□□□ 0.52
VTA1Q9NP79 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
VTA1Q9NP79 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.3■□□□□ 0.52
VTA1Q9NP79 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VTA1Q9NP79 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VTA1Q9NP79 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.3■□□□□ 0.52
VTA1Q9NP79 MIR4321-201ENST00000592276 80 ntBASIC18.3■□□□□ 0.52
VTA1Q9NP79 AL359881.2-201ENST00000602973 570 ntBASIC18.3■□□□□ 0.52
VTA1Q9NP79 GGT3P-204ENST00000453783 1664 ntBASIC18.3■□□□□ 0.52
VTA1Q9NP79 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
VTA1Q9NP79 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.3■□□□□ 0.52
VTA1Q9NP79 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VTA1Q9NP79 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VTA1Q9NP79 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
VTA1Q9NP79 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
VTA1Q9NP79 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VTA1Q9NP79 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VTA1Q9NP79 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
VTA1Q9NP79 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
VTA1Q9NP79 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTA1Q9NP79 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.29■□□□□ 0.52
VTA1Q9NP79 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTA1Q9NP79 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.29■□□□□ 0.52
VTA1Q9NP79 U82695.1-201ENST00000635752 1889 ntBASIC18.29■□□□□ 0.52
VTA1Q9NP79 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTA1Q9NP79 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTA1Q9NP79 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTA1Q9NP79 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTA1Q9NP79 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.29■□□□□ 0.52
VTA1Q9NP79 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTA1Q9NP79 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTA1Q9NP79 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTA1Q9NP79 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.29■□□□□ 0.52
VTA1Q9NP79 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTA1Q9NP79 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTA1Q9NP79 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTA1Q9NP79 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
VTA1Q9NP79 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.29■□□□□ 0.52
VTA1Q9NP79 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
VTA1Q9NP79 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.29■□□□□ 0.52
VTA1Q9NP79 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.29■□□□□ 0.52
VTA1Q9NP79 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTA1Q9NP79 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.29■□□□□ 0.52
VTA1Q9NP79 AC008494.3-201ENST00000606615 944 ntBASIC18.29■□□□□ 0.52
VTA1Q9NP79 AL008721.1-201ENST00000609964 604 ntBASIC18.29■□□□□ 0.52
VTA1Q9NP79 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.29■□□□□ 0.52
VTA1Q9NP79 AL109936.8-201ENST00000641772 604 ntBASIC18.29■□□□□ 0.52
VTA1Q9NP79 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.29■□□□□ 0.52
VTA1Q9NP79 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTA1Q9NP79 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
VTA1Q9NP79 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTA1Q9NP79 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTA1Q9NP79 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
VTA1Q9NP79 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTA1Q9NP79 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.29■□□□□ 0.52
VTA1Q9NP79 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.29■□□□□ 0.52
VTA1Q9NP79 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTA1Q9NP79 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTA1Q9NP79 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTA1Q9NP79 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
VTA1Q9NP79 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTA1Q9NP79 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTA1Q9NP79 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTA1Q9NP79 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
VTA1Q9NP79 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTA1Q9NP79 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.28■□□□□ 0.52
VTA1Q9NP79 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
VTA1Q9NP79 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.28■□□□□ 0.52
VTA1Q9NP79 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTA1Q9NP79 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTA1Q9NP79 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.28■□□□□ 0.52
VTA1Q9NP79 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTA1Q9NP79 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.28■□□□□ 0.52
VTA1Q9NP79 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.28■□□□□ 0.52
VTA1Q9NP79 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTA1Q9NP79 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
VTA1Q9NP79 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTA1Q9NP79 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.28■□□□□ 0.52
VTA1Q9NP79 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
VTA1Q9NP79 U91328.1-201ENST00000437528 223 ntBASIC18.28■□□□□ 0.52
VTA1Q9NP79 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.28■□□□□ 0.52
VTA1Q9NP79 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTA1Q9NP79 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.28■□□□□ 0.52
VTA1Q9NP79 TPRX2P-201ENST00000535362 881 ntBASIC18.28■□□□□ 0.52
VTA1Q9NP79 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.28■□□□□ 0.52
VTA1Q9NP79 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VTA1Q9NP79 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.28■□□□□ 0.52
VTA1Q9NP79 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.28■□□□□ 0.52
VTA1Q9NP79 AC099568.2-201ENST00000609194 695 ntBASIC18.28■□□□□ 0.52
VTA1Q9NP79 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
VTA1Q9NP79 AC007431.3-201ENST00000623221 587 ntBASIC18.28■□□□□ 0.52
VTA1Q9NP79 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTA1Q9NP79 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms