Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC003101.2-201ENST00000612557 442 ntBASIC19.25■□□□□ 0.67
TRIM47Q96LD4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 AC093525.9-201ENST00000624961 1746 ntBASIC19.25■□□□□ 0.67
TRIM47Q96LD4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM47Q96LD4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 SLC25A1P3-201ENST00000395415 828 ntBASIC19.24■□□□□ 0.67
TRIM47Q96LD4 HCG4-201ENST00000418983 998 ntBASIC19.24■□□□□ 0.67
TRIM47Q96LD4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 AC007967.4-201ENST00000614700 386 ntBASIC19.24■□□□□ 0.67
TRIM47Q96LD4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.24■□□□□ 0.67
TRIM47Q96LD4 SLC22A20-204ENST00000530038 1673 ntBASIC19.24■□□□□ 0.67
TRIM47Q96LD4 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.24■□□□□ 0.67
TRIM47Q96LD4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM47Q96LD4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM47Q96LD4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
TRIM47Q96LD4 AC138969.3-201ENST00000546612 1459 ntBASIC19.23■□□□□ 0.67
TRIM47Q96LD4 AC138932.2-201ENST00000548268 1459 ntBASIC19.23■□□□□ 0.67
TRIM47Q96LD4 AC126755.4-201ENST00000549796 1459 ntBASIC19.23■□□□□ 0.67
TRIM47Q96LD4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM47Q96LD4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM47Q96LD4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.23■□□□□ 0.67
TRIM47Q96LD4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM47Q96LD4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM47Q96LD4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.23■□□□□ 0.67
TRIM47Q96LD4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.23■□□□□ 0.67
TRIM47Q96LD4 AC142381.1-201ENST00000426099 345 ntBASIC19.23■□□□□ 0.67
TRIM47Q96LD4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.23■□□□□ 0.67
TRIM47Q96LD4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM47Q96LD4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.23■□□□□ 0.67
TRIM47Q96LD4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.23■□□□□ 0.67
TRIM47Q96LD4 API5-211ENST00000534695 560 ntTSL 5 BASIC19.23■□□□□ 0.67
TRIM47Q96LD4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.23■□□□□ 0.67
TRIM47Q96LD4 AC009407.1-201ENST00000568958 598 ntBASIC19.23■□□□□ 0.67
TRIM47Q96LD4 MIR3909-201ENST00000579518 119 ntBASIC19.23■□□□□ 0.67
TRIM47Q96LD4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRIM47Q96LD4 AC106886.4-201ENST00000623557 2502 ntBASIC19.23■□□□□ 0.67
TRIM47Q96LD4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TRIM47Q96LD4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM47Q96LD4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.23■□□□□ 0.67
TRIM47Q96LD4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM47Q96LD4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TRIM47Q96LD4 AP3S2-216ENST00000617003 1561 ntBASIC19.23■□□□□ 0.67
TRIM47Q96LD4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM47Q96LD4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM47Q96LD4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM47Q96LD4 LINC02012-201ENST00000608206 1725 ntBASIC19.22■□□□□ 0.67
TRIM47Q96LD4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 HLA-V-204ENST00000476601 1289 ntBASIC19.22■□□□□ 0.67
TRIM47Q96LD4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms