Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 AC092933.1-201ENST00000393644 945 ntBASIC16.5■□□□□ 0.23
SHDQ96IW2 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.5■□□□□ 0.23
SHDQ96IW2 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.5■□□□□ 0.23
SHDQ96IW2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.5■□□□□ 0.23
SHDQ96IW2 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.5■□□□□ 0.23
SHDQ96IW2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
SHDQ96IW2 CTBP2P5-201ENST00000454986 1264 ntBASIC16.5■□□□□ 0.23
SHDQ96IW2 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.5■□□□□ 0.23
SHDQ96IW2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHDQ96IW2 SLC25A47P1-201ENST00000531577 414 ntBASIC16.5■□□□□ 0.23
SHDQ96IW2 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.5■□□□□ 0.23
SHDQ96IW2 AL583810.1-201ENST00000553344 1045 ntBASIC16.5■□□□□ 0.23
SHDQ96IW2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.5■□□□□ 0.23
SHDQ96IW2 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.5■□□□□ 0.23
SHDQ96IW2 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.5■□□□□ 0.23
SHDQ96IW2 AL022328.1-201ENST00000610050 478 ntBASIC16.5■□□□□ 0.23
SHDQ96IW2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHDQ96IW2 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SHDQ96IW2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHDQ96IW2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHDQ96IW2 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SHDQ96IW2 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHDQ96IW2 KRT8P22-201ENST00000562317 1415 ntBASIC16.5■□□□□ 0.23
SHDQ96IW2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.5■□□□□ 0.23
SHDQ96IW2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHDQ96IW2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SHDQ96IW2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SHDQ96IW2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.5■□□□□ 0.23
SHDQ96IW2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHDQ96IW2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHDQ96IW2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHDQ96IW2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHDQ96IW2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SHDQ96IW2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.5■□□□□ 0.23
SHDQ96IW2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SHDQ96IW2 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.5■□□□□ 0.23
SHDQ96IW2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SHDQ96IW2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.49■□□□□ 0.23
SHDQ96IW2 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHDQ96IW2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHDQ96IW2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHDQ96IW2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SHDQ96IW2 SNX33P1-201ENST00000592116 1762 ntBASIC16.49■□□□□ 0.23
SHDQ96IW2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHDQ96IW2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.49■□□□□ 0.23
SHDQ96IW2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHDQ96IW2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHDQ96IW2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHDQ96IW2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHDQ96IW2 ANKRD19P-201ENST00000338192 862 ntBASIC16.49■□□□□ 0.23
SHDQ96IW2 AL355994.2-201ENST00000447882 704 ntBASIC16.49■□□□□ 0.23
SHDQ96IW2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.49■□□□□ 0.23
SHDQ96IW2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.49■□□□□ 0.23
SHDQ96IW2 USP32P1-208ENST00000506594 1164 ntBASIC16.49■□□□□ 0.23
SHDQ96IW2 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.49■□□□□ 0.23
SHDQ96IW2 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.49■□□□□ 0.23
SHDQ96IW2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.49■□□□□ 0.23
SHDQ96IW2 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.49■□□□□ 0.23
SHDQ96IW2 AC103810.3-201ENST00000583567 96 ntBASIC16.49■□□□□ 0.23
SHDQ96IW2 AC025048.3-201ENST00000590609 569 ntBASIC16.49■□□□□ 0.23
SHDQ96IW2 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHDQ96IW2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SHDQ96IW2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHDQ96IW2 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.49■□□□□ 0.23
SHDQ96IW2 AC133539.2-201ENST00000604757 467 ntBASIC16.49■□□□□ 0.23
SHDQ96IW2 AC005702.4-201ENST00000618393 416 ntBASIC16.49■□□□□ 0.23
SHDQ96IW2 AC068587.10-201ENST00000641210 219 ntBASIC16.49■□□□□ 0.23
SHDQ96IW2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHDQ96IW2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.49■□□□□ 0.23
SHDQ96IW2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHDQ96IW2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHDQ96IW2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
SHDQ96IW2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHDQ96IW2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SHDQ96IW2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHDQ96IW2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
SHDQ96IW2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.48■□□□□ 0.23
SHDQ96IW2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHDQ96IW2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHDQ96IW2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.48■□□□□ 0.23
SHDQ96IW2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.48■□□□□ 0.23
SHDQ96IW2 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
SHDQ96IW2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHDQ96IW2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SHDQ96IW2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SHDQ96IW2 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHDQ96IW2 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHDQ96IW2 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SHDQ96IW2 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.48■□□□□ 0.23
SHDQ96IW2 BCYRN1-201ENST00000418539 200 ntBASIC16.48■□□□□ 0.23
SHDQ96IW2 FAM21FP-201ENST00000426241 1131 ntBASIC16.48■□□□□ 0.23
SHDQ96IW2 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.48■□□□□ 0.23
SHDQ96IW2 RN7SL399P-201ENST00000471648 279 ntBASIC16.48■□□□□ 0.23
SHDQ96IW2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.48■□□□□ 0.23
SHDQ96IW2 RNA5SP412-201ENST00000516234 123 ntBASIC16.48■□□□□ 0.23
SHDQ96IW2 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SHDQ96IW2 AC036164.1-201ENST00000570544 333 ntBASIC16.48■□□□□ 0.23
SHDQ96IW2 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.48■□□□□ 0.23
SHDQ96IW2 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.48■□□□□ 0.23
SHDQ96IW2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms