Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC12.3□□□□□ -0.44
RNF183Q96D59 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF183Q96D59 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RNF183Q96D59 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
RNF183Q96D59 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF183Q96D59 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.29□□□□□ -0.44
RNF183Q96D59 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF183Q96D59 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC12.29□□□□□ -0.44
RNF183Q96D59 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
RNF183Q96D59 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF183Q96D59 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RNF183Q96D59 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC12.29□□□□□ -0.44
RNF183Q96D59 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF183Q96D59 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.29□□□□□ -0.44
RNF183Q96D59 AC140658.5-201ENST00000438532 169 ntBASIC12.29□□□□□ -0.44
RNF183Q96D59 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.29□□□□□ -0.44
RNF183Q96D59 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.29□□□□□ -0.44
RNF183Q96D59 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.29□□□□□ -0.44
RNF183Q96D59 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF183Q96D59 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF183Q96D59 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.29□□□□□ -0.44
RNF183Q96D59 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF183Q96D59 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RNF183Q96D59 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC12.29□□□□□ -0.44
RNF183Q96D59 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF183Q96D59 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC12.29□□□□□ -0.44
RNF183Q96D59 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RNF183Q96D59 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 AL021920.2-201ENST00000624828 1351 ntBASIC12.29□□□□□ -0.44
RNF183Q96D59 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RNF183Q96D59 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RNF183Q96D59 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC12.29□□□□□ -0.44
RNF183Q96D59 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
RNF183Q96D59 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RNF183Q96D59 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
RNF183Q96D59 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 AC012569.1-201ENST00000591191 1524 ntBASIC12.28□□□□□ -0.44
RNF183Q96D59 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
RNF183Q96D59 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 DOC2GP-204ENST00000639052 2548 ntBASIC12.28□□□□□ -0.44
RNF183Q96D59 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RNF183Q96D59 SLC25A1P3-201ENST00000395415 828 ntBASIC12.28□□□□□ -0.44
RNF183Q96D59 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.28□□□□□ -0.44
RNF183Q96D59 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC12.28□□□□□ -0.44
RNF183Q96D59 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 HCG4-201ENST00000418983 998 ntBASIC12.28□□□□□ -0.44
RNF183Q96D59 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.28□□□□□ -0.44
RNF183Q96D59 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RNF183Q96D59 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RNF183Q96D59 AP000344.2-201ENST00000512987 629 ntBASIC12.28□□□□□ -0.44
RNF183Q96D59 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.28□□□□□ -0.44
RNF183Q96D59 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.28□□□□□ -0.44
RNF183Q96D59 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.28□□□□□ -0.44
RNF183Q96D59 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms