Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CLDN23Q96B33 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN23Q96B33 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.25■□□□□ 0.19
CLDN23Q96B33 PFN1P12-201ENST00000455938 534 ntBASIC16.25■□□□□ 0.19
CLDN23Q96B33 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.25■□□□□ 0.19
CLDN23Q96B33 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN23Q96B33 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN23Q96B33 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN23Q96B33 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN23Q96B33 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN23Q96B33 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.25■□□□□ 0.19
CLDN23Q96B33 MIR4321-201ENST00000592276 80 ntBASIC16.25■□□□□ 0.19
CLDN23Q96B33 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.25■□□□□ 0.19
CLDN23Q96B33 LINC01115-203ENST00000606068 577 ntBASIC16.25■□□□□ 0.19
CLDN23Q96B33 AL365330.1-201ENST00000607459 531 ntBASIC16.25■□□□□ 0.19
CLDN23Q96B33 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN23Q96B33 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN23Q96B33 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN23Q96B33 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN23Q96B33 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CLDN23Q96B33 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN23Q96B33 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CLDN23Q96B33 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN23Q96B33 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN23Q96B33 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN23Q96B33 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN23Q96B33 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN23Q96B33 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
CLDN23Q96B33 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN23Q96B33 AC092068.3-201ENST00000587894 2016 ntBASIC16.24■□□□□ 0.19
CLDN23Q96B33 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN23Q96B33 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN23Q96B33 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN23Q96B33 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN23Q96B33 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN23Q96B33 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN23Q96B33 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN23Q96B33 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN23Q96B33 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
CLDN23Q96B33 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN23Q96B33 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDN23Q96B33 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CLDN23Q96B33 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN23Q96B33 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN23Q96B33 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDN23Q96B33 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CLDN23Q96B33 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.24■□□□□ 0.19
CLDN23Q96B33 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN23Q96B33 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN23Q96B33 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN23Q96B33 RPL13P2-201ENST00000440687 659 ntBASIC16.24■□□□□ 0.19
CLDN23Q96B33 BCRP2-202ENST00000447763 634 ntBASIC16.24■□□□□ 0.19
CLDN23Q96B33 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.24■□□□□ 0.19
CLDN23Q96B33 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.24■□□□□ 0.19
CLDN23Q96B33 BCRP6-201ENST00000510112 632 ntBASIC16.24■□□□□ 0.19
CLDN23Q96B33 BCRP7-201ENST00000511549 544 ntBASIC16.24■□□□□ 0.19
CLDN23Q96B33 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN23Q96B33 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN23Q96B33 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN23Q96B33 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CLDN23Q96B33 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN23Q96B33 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN23Q96B33 AL139099.5-201ENST00000635274 300 ntBASIC16.24■□□□□ 0.19
CLDN23Q96B33 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN23Q96B33 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
CLDN23Q96B33 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.24■□□□□ 0.19
CLDN23Q96B33 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDN23Q96B33 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN23Q96B33 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN23Q96B33 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN23Q96B33 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CLDN23Q96B33 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDN23Q96B33 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CLDN23Q96B33 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDN23Q96B33 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CLDN23Q96B33 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN23Q96B33 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN23Q96B33 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN23Q96B33 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN23Q96B33 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.24■□□□□ 0.19
CLDN23Q96B33 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN23Q96B33 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN23Q96B33 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN23Q96B33 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN23Q96B33 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.23■□□□□ 0.19
CLDN23Q96B33 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CLDN23Q96B33 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN23Q96B33 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN23Q96B33 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN23Q96B33 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN23Q96B33 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN23Q96B33 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN23Q96B33 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.23■□□□□ 0.19
CLDN23Q96B33 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CLDN23Q96B33 AP001889.1-201ENST00000525414 633 ntBASIC16.23■□□□□ 0.19
CLDN23Q96B33 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDN23Q96B33 PTP4A1P2-201ENST00000546033 454 ntBASIC16.23■□□□□ 0.19
CLDN23Q96B33 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDN23Q96B33 AL359711.2-201ENST00000563105 872 ntBASIC16.23■□□□□ 0.19
CLDN23Q96B33 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms