Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.14□□□□□ -0.15
USP9XQ93008 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
USP9XQ93008 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.14□□□□□ -0.15
USP9XQ93008 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.14□□□□□ -0.15
USP9XQ93008 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
USP9XQ93008 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.14□□□□□ -0.15
USP9XQ93008 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
USP9XQ93008 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
USP9XQ93008 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
USP9XQ93008 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
USP9XQ93008 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.14□□□□□ -0.15
USP9XQ93008 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
USP9XQ93008 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
USP9XQ93008 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
USP9XQ93008 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.14□□□□□ -0.15
USP9XQ93008 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
USP9XQ93008 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
USP9XQ93008 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
USP9XQ93008 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
USP9XQ93008 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
USP9XQ93008 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
USP9XQ93008 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.14□□□□□ -0.15
USP9XQ93008 AC012441.1-201ENST00000446669 685 ntBASIC14.14□□□□□ -0.15
USP9XQ93008 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.14□□□□□ -0.15
USP9XQ93008 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
USP9XQ93008 AC120045.2-201ENST00000567334 178 ntBASIC14.14□□□□□ -0.15
USP9XQ93008 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.14□□□□□ -0.15
USP9XQ93008 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.14□□□□□ -0.15
USP9XQ93008 AC097724.1-201ENST00000609581 426 ntBASIC14.14□□□□□ -0.15
USP9XQ93008 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.14□□□□□ -0.15
USP9XQ93008 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
USP9XQ93008 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
USP9XQ93008 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
USP9XQ93008 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
USP9XQ93008 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
USP9XQ93008 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
USP9XQ93008 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.14□□□□□ -0.15
USP9XQ93008 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
USP9XQ93008 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
USP9XQ93008 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.14□□□□□ -0.15
USP9XQ93008 RN7SL720P-201ENST00000488178 304 ntBASIC14.14□□□□□ -0.15
USP9XQ93008 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.14□□□□□ -0.15
USP9XQ93008 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
USP9XQ93008 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
USP9XQ93008 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
USP9XQ93008 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
USP9XQ93008 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.13□□□□□ -0.15
USP9XQ93008 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
USP9XQ93008 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
USP9XQ93008 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
USP9XQ93008 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
USP9XQ93008 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
USP9XQ93008 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
USP9XQ93008 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
USP9XQ93008 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
USP9XQ93008 FNTAP2-201ENST00000430308 634 ntBASIC14.13□□□□□ -0.15
USP9XQ93008 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
USP9XQ93008 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
USP9XQ93008 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.13□□□□□ -0.15
USP9XQ93008 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.13□□□□□ -0.15
USP9XQ93008 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.13□□□□□ -0.15
USP9XQ93008 AC024267.1-201ENST00000582320 895 ntBASIC14.13□□□□□ -0.15
USP9XQ93008 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.13□□□□□ -0.15
USP9XQ93008 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
USP9XQ93008 AP000974.1-201ENST00000623909 2387 ntBASIC14.13□□□□□ -0.15
USP9XQ93008 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.13□□□□□ -0.15
USP9XQ93008 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
USP9XQ93008 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.13□□□□□ -0.15
USP9XQ93008 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
USP9XQ93008 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
USP9XQ93008 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
USP9XQ93008 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
USP9XQ93008 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
USP9XQ93008 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
USP9XQ93008 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
USP9XQ93008 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
USP9XQ93008 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
USP9XQ93008 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
USP9XQ93008 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
USP9XQ93008 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.13□□□□□ -0.15
USP9XQ93008 RPL13P2-201ENST00000440687 659 ntBASIC14.13□□□□□ -0.15
USP9XQ93008 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.13□□□□□ -0.15
USP9XQ93008 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.13□□□□□ -0.15
USP9XQ93008 KRT18P66-201ENST00000452970 1269 ntBASIC14.13□□□□□ -0.15
USP9XQ93008 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
USP9XQ93008 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.13□□□□□ -0.15
USP9XQ93008 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.13□□□□□ -0.15
USP9XQ93008 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
USP9XQ93008 BRI3BPP1-201ENST00000594224 787 ntBASIC14.13□□□□□ -0.15
USP9XQ93008 NDUFV2P1-201ENST00000596415 907 ntBASIC14.13□□□□□ -0.15
USP9XQ93008 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.13□□□□□ -0.15
USP9XQ93008 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.13□□□□□ -0.15
USP9XQ93008 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
USP9XQ93008 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
USP9XQ93008 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
USP9XQ93008 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
USP9XQ93008 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
USP9XQ93008 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
USP9XQ93008 AL136982.4-201ENST00000437689 1740 ntBASIC14.12□□□□□ -0.15
USP9XQ93008 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms