Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 IGF1-203ENST00000392904 761 ntTSL 5 BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 RN7SL720P-201ENST00000488178 304 ntBASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 AC015910.1-201ENST00000579400 975 ntBASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 MIR3619-201ENST00000579667 83 ntBASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 AL512652.2-201ENST00000625156 1716 ntBASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ALMS1Q8TCU4 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 AL627389.1-201ENST00000413508 1182 ntBASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 AC005077.2-201ENST00000449786 690 ntBASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 AC104306.2-201ENST00000451877 341 ntBASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 UPF3AP2-201ENST00000457924 1132 ntBASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 AC104596.2-201ENST00000512793 793 ntBASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 MIR4741-201ENST00000579822 90 ntBASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 CSH2-202ENST00000345366 598 ntTSL 5 BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 KRT18P64-201ENST00000434946 1219 ntBASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 RPL13AP25-201ENST00000484130 612 ntBASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 HNRNPUP1-201ENST00000554987 333 ntBASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 FST-202ENST00000396947 2538 ntTSL 5 BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 AC016700.1-201ENST00000429424 312 ntBASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 CFL1-214ENST00000534769 758 ntTSL 2 BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 MIR3907-201ENST00000579424 151 ntBASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 AC136604.1-201ENST00000418535 575 ntBASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 AP006547.1-201ENST00000563435 692 ntBASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC10.87□□□□□ -0.67
ALMS1Q8TCU4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC10.86□□□□□ -0.67
ALMS1Q8TCU4 AL355334.1-201ENST00000417713 215 ntBASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms