Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 KRT8P19-201ENST00000551916 1455 ntBASIC11.28□□□□□ -0.6
CSMD3Q7Z407 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 RARRES2P5-201ENST00000564013 466 ntBASIC11.28□□□□□ -0.6
CSMD3Q7Z407 RN7SL219P-201ENST00000582872 296 ntBASIC11.28□□□□□ -0.6
CSMD3Q7Z407 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CSMD3Q7Z407 AC008764.6-201ENST00000595909 2069 ntBASIC11.28□□□□□ -0.6
CSMD3Q7Z407 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
CSMD3Q7Z407 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
CSMD3Q7Z407 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CSMD3Q7Z407 PTK7-212ENST00000476760 902 ntTSL 2 BASIC11.27□□□□□ -0.6
CSMD3Q7Z407 HNRNPUP1-201ENST00000554987 333 ntBASIC11.27□□□□□ -0.6
CSMD3Q7Z407 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
CSMD3Q7Z407 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC11.27□□□□□ -0.6
CSMD3Q7Z407 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CSMD3Q7Z407 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CSMD3Q7Z407 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
CSMD3Q7Z407 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
CSMD3Q7Z407 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
CSMD3Q7Z407 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
CSMD3Q7Z407 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
CSMD3Q7Z407 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
CSMD3Q7Z407 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
CSMD3Q7Z407 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
CSMD3Q7Z407 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
CSMD3Q7Z407 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 AC139713.2-201ENST00000641328 2723 ntBASIC11.27□□□□□ -0.61
CSMD3Q7Z407 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 AC253536.4-201ENST00000440539 267 ntBASIC11.27□□□□□ -0.61
CSMD3Q7Z407 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 TIMM17BP1-201ENST00000545713 516 ntBASIC11.27□□□□□ -0.61
CSMD3Q7Z407 AC124283.3-201ENST00000570869 594 ntBASIC11.27□□□□□ -0.61
CSMD3Q7Z407 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 GNE-204ENST00000539208 2190 ntTSL 2 BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 KRT8P22-201ENST00000562317 1415 ntBASIC11.27□□□□□ -0.61
CSMD3Q7Z407 AMT-206ENST00000458307 1860 ntTSL 2 BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 USE1-206ENST00000595101 1776 ntTSL 2 BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
CSMD3Q7Z407 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CSMD3Q7Z407 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CSMD3Q7Z407 AL442647.2-201ENST00000429864 857 ntBASIC11.26□□□□□ -0.61
CSMD3Q7Z407 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CSMD3Q7Z407 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC11.26□□□□□ -0.61
CSMD3Q7Z407 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CSMD3Q7Z407 AP001258.2-201ENST00000529891 490 ntBASIC11.26□□□□□ -0.61
CSMD3Q7Z407 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC11.26□□□□□ -0.61
CSMD3Q7Z407 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC11.26□□□□□ -0.61
CSMD3Q7Z407 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC11.26□□□□□ -0.61
CSMD3Q7Z407 AC013467.2-201ENST00000605472 835 ntBASIC11.26□□□□□ -0.61
CSMD3Q7Z407 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CSMD3Q7Z407 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
CSMD3Q7Z407 KRT8P39-201ENST00000396270 1433 ntBASIC11.26□□□□□ -0.61
CSMD3Q7Z407 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CSMD3Q7Z407 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms