Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBE3BQ7Z3V4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBE3BQ7Z3V4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBE3BQ7Z3V4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBE3BQ7Z3V4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBE3BQ7Z3V4 AC005052.1-201ENST00000625181 2492 ntBASIC20.46■□□□□ 0.87
UBE3BQ7Z3V4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBE3BQ7Z3V4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBE3BQ7Z3V4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
UBE3BQ7Z3V4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC20.46■□□□□ 0.87
UBE3BQ7Z3V4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.46■□□□□ 0.87
UBE3BQ7Z3V4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBE3BQ7Z3V4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 CETN4P-206ENST00000642099 2168 ntBASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 TEX28P1-201ENST00000613479 1221 ntBASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 TEX28P2-201ENST00000617764 1221 ntBASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.45■□□□□ 0.86
UBE3BQ7Z3V4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 AC024267.1-201ENST00000582320 895 ntBASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 AGGF1P2-201ENST00000426656 2106 ntBASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
UBE3BQ7Z3V4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 AL080243.2-201ENST00000418783 582 ntBASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 CCDC74BP1-201ENST00000508880 1123 ntBASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC20.43■□□□□ 0.86
UBE3BQ7Z3V4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms