Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CDC42BPAQ5VT25 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC24.46■■□□□ 1.51
CDC42BPAQ5VT25 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.51
CDC42BPAQ5VT25 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
CDC42BPAQ5VT25 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
CDC42BPAQ5VT25 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CDC42BPAQ5VT25 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CDC42BPAQ5VT25 MIR1908-201ENST00000410394 80 ntBASIC24.45■■□□□ 1.5
CDC42BPAQ5VT25 RPL28-203ENST00000428193 573 ntTSL 2 BASIC24.45■■□□□ 1.5
CDC42BPAQ5VT25 CSF2RBP1-201ENST00000447905 391 ntBASIC24.45■■□□□ 1.5
CDC42BPAQ5VT25 FAM86LP-201ENST00000478302 853 ntBASIC24.45■■□□□ 1.5
CDC42BPAQ5VT25 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
CDC42BPAQ5VT25 RPL28-207ENST00000558815 616 ntTSL 2 BASIC24.45■■□□□ 1.5
CDC42BPAQ5VT25 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC24.45■■□□□ 1.5
CDC42BPAQ5VT25 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC24.45■■□□□ 1.5
CDC42BPAQ5VT25 AC120045.2-201ENST00000567334 178 ntBASIC24.45■■□□□ 1.5
CDC42BPAQ5VT25 PIGL-212ENST00000581006 554 ntTSL 4 BASIC24.45■■□□□ 1.5
CDC42BPAQ5VT25 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC24.45■■□□□ 1.5
CDC42BPAQ5VT25 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC24.45■■□□□ 1.5
CDC42BPAQ5VT25 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CDC42BPAQ5VT25 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CDC42BPAQ5VT25 TP73-213ENST00000604479 1623 ntTSL 5 BASIC24.45■■□□□ 1.5
CDC42BPAQ5VT25 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
CDC42BPAQ5VT25 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CDC42BPAQ5VT25 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC24.45■■□□□ 1.5
CDC42BPAQ5VT25 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CDC42BPAQ5VT25 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CDC42BPAQ5VT25 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC24.45■■□□□ 1.5
CDC42BPAQ5VT25 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
CDC42BPAQ5VT25 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CDC42BPAQ5VT25 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 AC106760.1-201ENST00000508690 800 ntBASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 KRT8P22-201ENST00000562317 1415 ntBASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 LBX2-201ENST00000341396 886 ntTSL 3 BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 AC243562.2-201ENST00000561247 970 ntBASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CDC42BPAQ5VT25 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 RNF216P1-203ENST00000404404 2427 ntBASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 BNIP3P1-202ENST00000550043 1585 ntBASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 AC099548.2-209ENST00000480264 625 ntBASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 HNRNPA1P13-201ENST00000510646 963 ntBASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 SLED1-202ENST00000512051 380 ntBASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 TIMM17BP1-201ENST00000545713 516 ntBASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC24.43■■□□□ 1.5
CDC42BPAQ5VT25 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC24.42■■□□□ 1.5
CDC42BPAQ5VT25 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDC42BPAQ5VT25 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDC42BPAQ5VT25 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
CDC42BPAQ5VT25 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDC42BPAQ5VT25 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC24.42■■□□□ 1.5
CDC42BPAQ5VT25 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC24.42■■□□□ 1.5
CDC42BPAQ5VT25 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDC42BPAQ5VT25 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDC42BPAQ5VT25 SOCS2P1-201ENST00000417727 557 ntBASIC24.42■■□□□ 1.5
CDC42BPAQ5VT25 KRT43P-201ENST00000434019 910 ntBASIC24.42■■□□□ 1.5
CDC42BPAQ5VT25 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms